RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA888821" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 3 ✖

tax_clade 1

bioproject 1

  • PRJNA888821 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
30813724 30813724 PRJNA888821_P_NODE_20354_length_309_cov_14.614407_g20272_i0 PRJNA888821 20354 309 14.614407 45.15851763 Minisyncoccota bacterium 2053589 Bacteria Bacteria 82.4 3.22e-16   NR MFA5387865.1 2053589 g20272 i0 43.2 1.14563106796116 118 33 81.6 1 56 307 1 118 MFA5387865.1 DUF3383 family protein [Candidatus Paceibacterota bacterium] diamond 354 82.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
30845427 30845427 PRJNA888821_P_NODE_30154_length_269_cov_6.005102_g30071_i0 PRJNA888821 30154 269 6.005102 16.15372438 Minisyncoccota bacterium 2053589 Bacteria Bacteria 49.3 2.43e-4   NR MEX0597858.1 2053589 g30071 i0 57.5 1.01486988847584 40 15 42.4 1 147 34 204 243 MEX0597858.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 273 49.3 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
31351149 31351149 PRJNA888821_P_NODE_12856_length_310_cov_8.240506_g12774_i0 PRJNA888821 12856 310 8.240506 25.5455686 Minisyncoccota bacterium 2053589 Bacteria Bacteria 84 1.85e-16   NR MEX0596241.1 2053589 g12774 i0 75.5 0.474193548387097 49 12 47.4 0 147 1 62 110 MEX0596241.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 147 84 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;