RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA888821" and tax_phylum = "Candidatus Nomuraibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Candidatus Nomuraibacteriota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA888821 · 2 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3413718 3413718 PRJNA888821_P_NODE_37623_length_245_cov_0.895349_g37540_i0 PRJNA888821 37623 245 0.895349 2.19360505 Candidatus Nomurabacteria bacterium 2052152 Bacteria Bacteria 398 2.47e-106   NTclustered gi|2258875662|gb|CP060232.1| 2052152 g37540 i0 95.935 264.604081632653 246 9 100 1 1 245 964068 964313 MAG: Candidatus Nomurabacteria bacterium isolate HK-STAS-PATE-40 chromosome, complete genome blastn 64828 398 1 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium
16544245 16544245 PRJNA888821_P_NODE_21093_length_309_cov_8.906780_g21011_i0 PRJNA888821 21093 309 8.90678 27.5219502 Bacteria 2 Bacteria Bacteria 95.1 2e-20   NR USN96832.1 2052152 g21011 i0 91.8 10.4563106796117 49 4 47.6 0 309 163 217 265 USN96832.1 MAG: serine hydroxymethyltransferase [Candidatus Nomurabacteria bacterium] diamond 3231 95.9 0.991657977059437 Bacteria Bacteria candidate phyla   Candidatus Nomuraibacteriota         Candidatus Nomurabacteria bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;