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contig_metadata

26 rows where bioproject = "PRJNA888821", tax_phylum = "Armatimonadota" and tax_superkingdom = "Bacteria"

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analysis 2

tax_superkingdom 1

  • Bacteria · 26 ✖

tax_phylum 1

  • Armatimonadota · 26 ✖

tax_kingdom 1

bioproject 1

  • PRJNA888821 · 26 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3413396 3413396 PRJNA888821_P_NODE_18123_length_310_cov_4.308017_g18041_i0 PRJNA888821 18123 310 4.308017 13.3548527 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 150 9.98e-32   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g18041 i0 85.034 1.34516129032258 147 22 47 0 163 309 359110 359256 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 417 150 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
3793976 3793976 PRJNA888821_P_NODE_50523_length_204_cov_8.137405_g50440_i0 PRJNA888821 50523 204 8.137405 16.6003062 Chthonomonas 1077265 Bacteria Bacteria 134 6.1800000000000006e-27   NTclustered gi|526641997|ref|NR_103994.1| 454171 g50440 i0 80.11 195.700980392157 181 34 88 2 26 204 2808 2628 Chthonomonas calidirosea strain T49 23S ribosomal RNA gene, complete sequence blastn 39923 134 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae Chthonomonas Chthonomonas calidirosea
12341696 12341696 PRJNA888821_P_NODE_14610_length_310_cov_6.848101_g14528_i0 PRJNA888821 14610 310 6.848101 21.2291131 Armatimonadota bacterium 2033014 Bacteria Bacteria 184 3.4e-54   NR MCL6534162.1 2033014 g14528 i0 75 1.23870967741935 128 7 99.7 1 309 1 291 418 MCL6534162.1 hypothetical protein [Armatimonadota bacterium] diamond 384 184 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
13616564 13616564 PRJNA888821_P_NODE_36411_length_247_cov_5.632184_g36328_i0 PRJNA888821 36411 247 5.632184 13.91149448 Armatimonadota bacterium 2033014 Bacteria Bacteria 123 4.9099999999999996e-32   NR MBW3622697.1 2033014 g36328 i0 71.3 11.8785425101215 80 23 97.2 0 1 240 159 238 MBW3622697.1 sigma-70 family RNA polymerase sigma factor [Armatimonadota bacterium] diamond 2934 123 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
13616710 13616710 PRJNA888821_P_NODE_43951_length_225_cov_7.118421_g43868_i0 PRJNA888821 43951 225 7.118421 16.01644725 Capsulimonas corticalis 2219043 Bacteria Bacteria 222 1.44e-53   NTclustered gi|2240447379|dbj|AP025739.1| 2219043 g43868 i0 84.444 288.164444444444 225 35 100 0 1 225 592646 592870 Capsulimonas corticalis AX-7 DNA, complete genome blastn 64837 222 1 Bacteria   Bacillati Armatimonadota Armatimonadia Capsulimonadales Capsulimonadaceae Capsulimonas Capsulimonas corticalis
13616798 13616798 PRJNA888821_P_NODE_48811_length_209_cov_7.352941_g48728_i0 PRJNA888821 48811 209 7.352941 15.36764669 Armatimonadota bacterium 2033014 Bacteria Bacteria 91.7 7.78e-20   NR MBC8103048.1 2033014 g48728 i0 63.8 0.990430622009569 69 25 99 0 209 3 217 285 MBC8103048.1 response regulator [Armatimonadota bacterium] diamond 207 91.7 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
17441007 17441007 PRJNA888821_P_NODE_31214_length_264_cov_15.287958_g31131_i0 PRJNA888821 31214 264 15.287958 40.36020912 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 106 1.83e-18   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g31131 i0 81.818 1.18939393939394 132 19 50 5 1 131 2072157 2072030 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 314 106 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
17441102 17441102 PRJNA888821_P_NODE_36294_length_247_cov_11.770115_g36211_i0 PRJNA888821 36294 247 11.770115 29.07218405 Fimbriimonadales bacterium 2682145 Bacteria Bacteria 226 1.2399999999999997e-54   NTclustered gi|2314715370|dbj|AP024673.1| 2682145 g36211 i0 83.471 0.979757085020243 242 40 98 0 3 244 2529226 2529467 MAG: Fimbriimonadales bacterium KatS3mg018 DNA, complete genome blastn 242 226 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales     Fimbriimonadales bacterium
17819292 17819292 PRJNA888821_P_NODE_22634_length_307_cov_10.025641_g22552_i0 PRJNA888821 22634 307 10.025641 30.77871787 PVC group 1783257 Bacteria Bacteria 71.3 7.91e-8   NTclustered gi|663071213|gb|CP007139.1| 661478 g22552 i0 97.561 2.14983713355049 41 1 14 0 165 205 2209799 2209839 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 660 71.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
17819464 17819464 PRJNA888821_P_NODE_38854_length_242_cov_0.911243_g38771_i0 PRJNA888821 38854 242 0.911243 2.20520806 Fimbriimonas 1005038 Bacteria Bacteria 375 1.14e-99   NTclustered gi|663071213|gb|CP007139.1| 661478 g38771 i0 94.65 261.669421487603 243 11 100 2 1 242 29027 28786 Fimbriimonas ginsengisoli Gsoil 348, complete genome blastn 63324 375 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae Fimbriimonas Fimbriimonas ginsengisoli
26802220 26802220 PRJNA888821_P_NODE_35021_length_250_cov_6.627119_g34938_i0 PRJNA888821 35021 250 6.627119 16.5677975 Armatimonadetes bacterium DC 1661583 Bacteria Bacteria 140 3.77e-38   NR CUU36901.1 1661583 g34938 i0 97.1 0.816 68 2 81.6 0 206 3 4 71 CUU36901.1 Putative transposase, YhgA-like [Armatimonadetes bacterium DC] diamond 204 140 1 Bacteria   Bacillati Armatimonadota         Armatimonadetes bacterium DC
28034777 28034777 PRJNA888821_P_NODE_9785_length_310_cov_11.392405_g9703_i0 PRJNA888821 9785 310 11.392405 35.316455499999996 Armatimonadota bacterium 2033014 Bacteria Bacteria 104 1.3e-23   NR MCL6533188.1 2033014 g9703 i0 100 1.45161290322581 50 0 48.4 0 150 1 295 344 MCL6533188.1 hypothetical protein [Armatimonadota bacterium] diamond 450 104 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28666228 28666228 PRJNA888821_P_NODE_16747_length_310_cov_5.333333_g16665_i0 PRJNA888821 16747 310 5.333333 16.5333323 Armatimonadota bacterium 2033014 Bacteria Bacteria 185 2.4399999999999998e-54   NR MCL6532822.1 2033014 g16665 i0 74.6 1.25806451612903 130 5 98.7 1 309 4 324 453 MCL6532822.1 FAD-binding oxidoreductase [Armatimonadota bacterium] diamond 390 185 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
28823682 28823682 PRJNA888821_P_NODE_10808_length_310_cov_10.172996_g10726_i0 PRJNA888821 10808 310 10.172996 31.5362876 Armatimonadota bacterium 2033014 Bacteria Bacteria 192 2.1599999999999995e-54   NR MCL6531898.1 2033014 g10726 i0 96.1 0.996774193548387 103 2 99.7 1 310 2 718 818 MCL6531898.1 SEC-C domain-containing protein [Armatimonadota bacterium] diamond 309 192 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29045124 29045124 PRJNA888821_P_NODE_26848_length_284_cov_3.606635_g26766_i0 PRJNA888821 26848 284 3.606635 10.2428434 Armatimonadota bacterium 2033014 Bacteria Bacteria 196 2.4199999999999997e-57   NR MCL6532757.1 2033014 g26766 i0 100 0.992957746478873 94 0 99.3 0 284 3 144 237 MCL6532757.1 hypothetical protein [Armatimonadota bacterium] diamond 282 196 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29203017 29203017 PRJNA888821_P_NODE_28589_length_276_cov_4.492611_g28507_i0 PRJNA888821 28589 276 4.492611 12.39960636 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 150 5.52e-42   NR MBC8064280.1 2682144 g28507 i0 73.9 3 92 24 100 0 1 276 89 180 MBC8064280.1 type IV pilus twitching motility protein PilT [Fimbriimonadaceae bacterium] diamond 828 150 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
29329108 29329108 PRJNA888821_P_NODE_46229_length_217_cov_6.604167_g46146_i0 PRJNA888821 46229 217 6.604167 14.33104239 Armatimonadota bacterium 2033014 Bacteria Bacteria 161 3.7899999999999997e-47   NR MCL6531758.1 2033014 g46146 i0 100 0.995391705069124 72 0 99.5 0 1 216 134 205 MCL6531758.1 glycosyltransferase family 2 protein [Armatimonadota bacterium] diamond 216 161 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
29739341 29739341 PRJNA888821_P_NODE_40230_length_238_cov_4.818182_g40147_i0 PRJNA888821 40230 238 4.818182 11.46727316 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 75.9 4.64e-14   NR HLJ57032.1 2739509 g40147 i0 54.4 0.995798319327731 79 32 99.6 2 1 237 192 266 HLJ57032.1 NAD-dependent epimerase/dehydratase family protein [Chthonomonadaceae bacterium] diamond 237 75.9 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
29739342 29739342 PRJNA888821_P_NODE_50350_length_204_cov_16.320611_g50267_i0 PRJNA888821 50350 204 16.320611 33.29404644 Armatimonadota bacterium 2033014 Bacteria Bacteria 83.2 1.3e-16   NR MCL6533827.1 2033014 g50267 i0 100 0.647058823529412 44 0 64.7 0 1 132 1284 1327 MCL6533827.1 DNA-directed RNA polymerase subunit beta [Armatimonadota bacterium] diamond 132 83.2 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
30560769 30560769 PRJNA888821_P_NODE_34893_length_251_cov_0.865169_g34810_i0 PRJNA888821 34893 251 0.865169 2.17157419 Fimbriimonadaceae bacterium 2682144 Bacteria Bacteria 81.3 2.48e-18   NR MEQ1935684.1 2682144 g34810 i0 87.2 0.561752988047809 47 6 56.2 0 2 142 10 56 MEQ1935684.1 hypothetical protein [Fimbriimonadaceae bacterium] diamond 141 81.3 1 Bacteria   Bacillati Armatimonadota Fimbriimonadia Fimbriimonadales Fimbriimonadaceae   Fimbriimonadaceae bacterium
30655711 30655711 PRJNA888821_P_NODE_14933_length_310_cov_6.594937_g14851_i0 PRJNA888821 14933 310 6.594937 20.4443047 Armatimonadota bacterium 2033014 Bacteria Bacteria 95.9 8.419999999999999e-23   NR MCS7235757.1 2033014 g14851 i0 93.8 0.464516129032258 48 3 46.5 0 161 304 92 139 MCS7235757.1 thermonuclease family protein [Armatimonadota bacterium] diamond 144 95.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32395149 32395149 PRJNA888821_P_NODE_20379_length_309_cov_14.283898_g20297_i0 PRJNA888821 20379 309 14.283898 44.13724482 Armatimonadota bacterium 2033014 Bacteria Bacteria 101 1.4000000000000002e-22   NR MCL6532822.1 2033014 g20297 i0 100 0.475728155339806 49 0 47.6 0 149 3 84 132 MCL6532822.1 FAD-binding oxidoreductase [Armatimonadota bacterium] diamond 147 101 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32426705 32426705 PRJNA888821_P_NODE_38939_length_242_cov_0.911243_g38856_i0 PRJNA888821 38939 242 0.911243 2.20520806 Chthonomonadaceae bacterium 2739509 Bacteria Bacteria 120 3.5199999999999995e-31   NR MCW3098136.1 2739509 g38856 i0 69.6 1.94628099173554 79 24 97.9 0 241 5 200 278 MCW3098136.1 Phytoene/squalene synthetase [Chthonomonadaceae bacterium] diamond 471 120 1 Bacteria   Bacillati Armatimonadota Chthonomonadia Chthonomonadales Chthonomonadaceae   Chthonomonadaceae bacterium
32490142 32490142 PRJNA888821_P_NODE_47199_length_214_cov_6.503546_g47116_i0 PRJNA888821 47199 214 6.503546 13.91758844 Armatimonadota bacterium 2033014 Bacteria Bacteria 139 2.29e-37   NR MCL6532823.1 2033014 g47116 i0 100 0.981308411214953 70 0 98.1 0 3 212 193 262 MCL6532823.1 prolyl oligopeptidase family serine peptidase [Armatimonadota bacterium] diamond 210 139 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32623982 32623982 PRJNA888821_P_NODE_10020_length_310_cov_11.097046_g9938_i0 PRJNA888821 10020 310 11.097046 34.4008426 Bacteria 2 Bacteria Bacteria 58.2 4.55e-8   NR MFM7321936.1 2033014 g9938 i0 65.8 0.725806451612903 38 13 36.8 0 163 276 102 139 MFM7321936.1 acetyl-CoA carboxylase biotin carboxyl carrier protein [Armatimonadota bacterium] diamond 225 58.5 0.994871794871795 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium
32836577 32836577 PRJNA888821_P_NODE_40240_length_238_cov_4.472727_g40157_i0 PRJNA888821 40240 238 4.472727 10.64509026 Armatimonadota bacterium 2033014 Bacteria Bacteria 97.4 1.08e-21   NR MCL6532985.1 2033014 g40157 i0 100 0.567226890756303 45 0 56.7 0 2 136 36 80 MCL6532985.1 PEP-CTERM sorting domain-containing protein [Armatimonadota bacterium] diamond 135 97.4 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;