RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA888821", tax_kingdom = "Thermotogati" and tax_phylum = "Synergistota"

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tax_superkingdom 1

tax_phylum 1

  • Synergistota · 2 ✖

tax_kingdom 1

  • Thermotogati · 2 ✖

bioproject 1

  • PRJNA888821 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27063331 27063331 PRJNA888821_P_NODE_3522_length_372_cov_11.732441_g3441_i0 PRJNA888821 3522 372 11.732441 43.64468052 Bacteria candidate phyla 1783234 Bacteria Bacteria 89.7 4.65e-18   NR WP_299079334.1 1678694 g3441 i0 62.7 4.2741935483871 75 28 60.5 0 2 226 61 135 WP_299079334.1 ATPase domain-containing protein, partial [uncultured Fretibacterium sp.] diamond 1590 90.1 0.995560488346282 Bacteria   Thermotogati Synergistota Synergistia Synergistales Aminobacteriaceae Fretibacterium uncultured Fretibacterium sp.
28989983 28989983 PRJNA888821_P_NODE_25928_length_288_cov_9.711628_g25846_i0 PRJNA888821 25928 288 9.711628 27.96948864 Pyramidobacter 638847 Bacteria Bacteria 59.7 7.45e-8   NR WP_244389476.1 638849 g25846 i0 44.3 2.46875 79 30 67.7 1 1 195 1026 1104 WP_244389476.1 hypothetical protein [Pyramidobacter piscolens] diamond 711 59.7 1 Bacteria   Thermotogati Synergistota Synergistia Synergistales Dethiosulfovibrionaceae Pyramidobacter Pyramidobacter piscolens

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;