contig_metadata
5 rows where bioproject = "PRJNA888821" and tax_kingdom = "Thermoproteati"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 4691514 | 4691514 | PRJNA888821_P_NODE_46724_length_215_cov_11.591549_g46641_i0 | PRJNA888821 | 46724 | 215 | 11.591549 | 24.92183035 | Saccharolobus islandicus | 43080 | Archaea | Archaea | 300 | 6.13e-77 | NTclustered | gi|323473489|gb|CP002425.1| | 930945 | g46641 | i0 | 91.102 | 78.646511627907 | 236 | 0 | 100 | 1 | 1 | 215 | 890958 | 890723 | Sulfolobus islandicus REY15A, complete genome | blastn | 16909 | 300 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoprotei | Sulfolobales | Sulfolobaceae | Saccharolobus | Saccharolobus islandicus | ||
| 28918492 | 28918492 | PRJNA888821_P_NODE_44308_length_223_cov_26.386667_g44225_i0 | PRJNA888821 | 44308 | 223 | 26.386667 | 58.84226741 | Thermoproteota archaeon | 2056631 | Archaea | Archaea | 154 | 1.77e-46 | NR | MDQ3727269.1 | 2056631 | g44225 | i0 | 98.6 | 2.94618834080717 | 74 | 1 | 99.6 | 0 | 222 | 1 | 15 | 88 | MDQ3727269.1 hypothetical protein [Thermoproteota archaeon] | diamond | 657 | 154 | 1 | Archaea | Thermoproteati | Thermoproteota | Thermoproteota archaeon | ||||||
| 31192530 | 31192530 | PRJNA888821_P_NODE_14675_length_310_cov_6.793249_g14593_i0 | PRJNA888821 | 14675 | 310 | 6.793249 | 21.0590719 | Nitrososphaerales archaeon | 2268197 | Archaea | Archaea | 60.5 | 1e-8 | NR | MFI5407391.1 | 2268197 | g14593 | i0 | 63.6 | 0.851612903225806 | 44 | 16 | 42.6 | 0 | 149 | 18 | 124 | 167 | MFI5407391.1 endonuclease/exonuclease/phosphatase family protein [Nitrososphaerales archaeon] | diamond | 264 | 60.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaerales archaeon | ||||
| 31667253 | 31667253 | PRJNA888821_P_NODE_29457_length_272_cov_6.788945_g29375_i0 | PRJNA888821 | 29457 | 272 | 6.788945 | 18.4659304 | Candidatus Nitrosocosmicus sp. | 2109671 | Archaea | Archaea | 53.5 | 1.97e-6 | NR | MDR4489495.1 | 2109671 | g29375 | i0 | 57.4 | 0.518382352941177 | 47 | 19 | 51.8 | 1 | 149 | 9 | 1 | 46 | MDR4489495.1 hypothetical protein [Candidatus Nitrosocosmicus sp.] | diamond | 141 | 53.5 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Candidatus Nitrosocosmicus | Candidatus Nitrosocosmicus sp. | ||
| 32300464 | 32300464 | PRJNA888821_P_NODE_31379_length_264_cov_3.952880_g31296_i0 | PRJNA888821 | 31379 | 264 | 3.95288 | 10.4356032 | Nitrososphaeraceae archaeon | 2169593 | Archaea | Archaea | 139 | 9.74e-39 | NR | HEX6646956.1 | 2169593 | g31296 | i0 | 83.5 | 0.897727272727273 | 79 | 13 | 89.8 | 0 | 237 | 1 | 1 | 79 | HEX6646956.1 phosphate ABC transporter ATP-binding protein PstB [Nitrososphaeraceae archaeon] | diamond | 237 | 139 | 1 | Archaea | Thermoproteati | Nitrososphaerota | Nitrososphaeria | Nitrososphaerales | Nitrososphaeraceae | Nitrososphaeraceae archaeon |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;