RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA888821", tax_kingdom = "Bacillati" and tax_phylum = "Vulcanimicrobiota"

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tax_superkingdom 1

tax_phylum 1

  • Vulcanimicrobiota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA888821 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4690960 4690960 PRJNA888821_P_NODE_13784_length_310_cov_7.489451_g13702_i0 PRJNA888821 13784 310 7.489451 23.2172981 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 189 2.12e-43   NTclustered gi|2874254122|emb|OY970207.1| 3107663 g13702 i0 89.333 14.4483870967742 150 16 48 0 1 150 293088 293237 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD10113.bin.c.5 genome assembly, chromosome: 1 blastn 4479 189 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium
12341777 12341777 PRJNA888821_P_NODE_20250_length_309_cov_15.843220_g20168_i0 PRJNA888821 20250 309 15.84322 48.9555498 Vulcanimicrobiota bacterium 3107663 Bacteria Bacteria 102 2.82e-17   NTclustered gi|2874253824|emb|OY969808.1| 3107663 g20168 i0 83.478 37.2168284789644 115 14 37 5 31 143 2776978 2777089 MAG: Candidatus Eremiobacteraeota bacterium isolate MFD04463.bin.c.1 genome assembly, chromosome: 1 blastn 11500 102 1 Bacteria   Bacillati Vulcanimicrobiota         Vulcanimicrobiota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;