RNAquarium Metadata Server
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contig_metadata

8 rows where bioproject = "PRJNA888821" and tax_clade = "Stenosarchaea group"

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analysis 2

tax_superkingdom 1

tax_phylum 1

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 8 ✖

bioproject 1

  • PRJNA888821 · 8 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
23815076 23815076 PRJNA888821_P_NODE_33879_length_254_cov_1.607735_g33796_i0 PRJNA888821 33879 254 1.607735 4.0836469 Haloferax sp. S1W 3377110 Archaea Archaea 363 9.379999999999998e-96   NTclustered gi|2845113841|gb|CP172600.1| 3377110 g33796 i0 92.8 1.96850393700787 250 18 98 0 5 254 49973 50222 Haloferax sp. S1W plasmid pHFX5, complete sequence blastn 500 363 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Haloferax Haloferax sp. S1W
27149872 27149872 PRJNA888821_P_NODE_45582_length_219_cov_7.924658_g45499_i0 PRJNA888821 45582 219 7.924658 17.35500102 Halobacterium bonnevillei 2692200 Archaea Archaea 72.4 5.29e-13   NR WP_159526771.1 2692200 g45499 i0 85 1.08219178082192 40 6 54.8 0 2 121 262 301 WP_159526771.1 ABC transporter permease [Halobacterium bonnevillei] diamond 237 72.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae Halobacterium Halobacterium bonnevillei
28097715 28097715 PRJNA888821_P_NODE_49465_length_207_cov_8.037313_g49382_i0 PRJNA888821 49465 207 8.037313 16.63723791 Halobacteriaceae archaeon 1931997 Archaea Archaea 98.2 6.29e-22   NR MFB6255096.1 1931997 g49382 i0 69.6 2 69 21 100 0 1 207 111 179 MFB6255096.1 uracil-xanthine permease family protein [Halobacteriaceae archaeon] diamond 414 98.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Halobacteriaceae   Halobacteriaceae archaeon
28571314 28571314 PRJNA888821_P_NODE_24727_length_293_cov_3.477273_g24645_i0 PRJNA888821 24727 293 3.477273 10.18840989 Methanothrix sp. 90426 Archaea Archaea 61.2 4.67e-9   NR MCK9566439.1 90426 g24645 i0 78.1 0.327645051194539 32 7 32.8 0 122 27 1 32 MCK9566439.1 HNH endonuclease [Methanothrix sp.] diamond 96 61.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanotrichales Methanotrichaceae Methanothrix Methanothrix sp.
28855348 28855348 PRJNA888821_P_NODE_27448_length_281_cov_7.442308_g27366_i0 PRJNA888821 27448 281 7.442308 20.91288548 Halolamina sp. 1940283 Archaea Archaea 66.2 2.28e-12   NR WP_014050829.1 1940283 g27366 i0 82.9 0.437722419928826 41 7 43.8 0 47 169 1 41 WP_014050829.1 hypothetical protein [Halolamina sp.] diamond 123 66.2 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina sp.
29265826 29265826 PRJNA888821_P_NODE_37409_length_245_cov_4.075581_g37326_i0 PRJNA888821 37409 245 4.075581 9.98517345 Halolamina sp. 1940283 Archaea Archaea 67.4 4.51e-11   NR MFB6221925.1 1940283 g37326 i0 70 1.22448979591837 50 12 61.2 1 204 55 55 101 MFB6221925.1 hypothetical protein [Halolamina sp.] diamond 300 67.4 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Haloferacaceae Halolamina Halolamina sp.
30348222 30348222 PRJNA888821_P_NODE_38752_length_242_cov_4.254438_g38669_i0 PRJNA888821 38752 242 4.254438 10.29573996 Halobacteriales 2235 Archaea Archaea 120 2.0099999999999997e-30   NR WP_338914891.1 2162630 g38669 i0 72.4 1.88429752066116 76 21 94.2 0 242 15 184 259 WP_338914891.1 MULTISPECIES: amidohydrolase family protein [Salinirubellus] diamond 456 120 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales Natronomonadaceae Salinirubellus  
32836583 32836583 PRJNA888821_P_NODE_49380_length_207_cov_11.768657_g49297_i0 PRJNA888821 49380 207 11.768657 24.36111999 halophilic archaeon DL31 756883 Archaea Archaea 62.8 2.78e-11   NR AEN07052.1 756883 g49297 i0 78.9 0.550724637681159 38 8 55.1 0 115 2 3 40 AEN07052.1 hypothetical protein Halar_3454 [halophilic archaeon DL31] diamond 114 62.8 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Halobacteria Halobacteriales     halophilic archaeon DL31

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;