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contig_metadata

24 rows where bioproject = "PRJNA888821" and tax_clade = "Discoba"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Discoba · 24 ✖

bioproject 1

  • PRJNA888821 · 24 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3413879 3413879 PRJNA888821_P_NODE_47323_length_213_cov_15.600000_g47240_i0 PRJNA888821 47323 213 15.6 33.228 Phacus smulkowskianus 135591 Euglenozoa other_Eukaryota 195 2.94e-45   NTclustered gi|21239038|gb|AF188117.1| 135591 g47240 i0 84.343 0.929577464788732 198 31 93 0 16 213 680 483 Phacus smulkowskianus culture SAG:58.81 strain SAG 58.81 paraxonemal rod protein PAR 1 mRNA, partial cds blastn 198 195 1 Eukaryota Discoba   Euglenozoa Euglenida Euglenales Phacaceae Phacus Phacus smulkowskianus
3793658 3793658 PRJNA888821_P_NODE_23683_length_301_cov_1.276316_g23601_i0 PRJNA888821 23683 301 1.276316 3.84171116 Naegleria 5761 Heterolobosea other_Eukaryota 490 5.01e-134   NTclustered gi|2618963742|gb|OR769034.1| 5762 g23601 i0 96.013 10.3488372093023 301 12 100 0 1 301 5747 5447 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3115 490 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
4691637 4691637 PRJNA888821_P_NODE_6624_length_311_cov_2.390756_g6542_i0 PRJNA888821 6624 311 2.390756 7.43525116 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 562 1.09e-155   NTclustered gi|11466174|ref|NC_002573.1| 5762 g6542 i0 99.357 91.4019292604502 311 1 100 1 1 311 2582 2273 Naegleria gruberi mitochondrion, complete genome blastn 28426 562 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
7241032 7241032 PRJNA888821_P_NODE_36886_length_246_cov_5.497110_g36803_i0 PRJNA888821 36886 246 5.49711 13.5228906 Entosiphon sp. 1921133 Euglenozoa other_Eukaryota 228 3.4399999999999986e-55   NTclustered gi|1547024950|gb|MK213406.1| 1921133 g36803 i0 84.81 26.8333333333333 237 24 96 6 1 237 1550 1326 Entosiphon sp. strain ESC small subunit ribosomal RNA, partial sequence blastn 6601 228 1 Eukaryota Discoba   Euglenozoa Euglenida Heteronematales Peranemataceae Entosiphon Entosiphon sp.
8515429 8515429 PRJNA888821_P_NODE_127_length_1222_cov_5.048738_g100_i0 PRJNA888821 127 1222 5.048738 61.69557836 Neobodo designis 312471 Euglenozoa other_Eukaryota 1799 0   NTclustered gi|197723537|gb|EF681922.2| 312471 g100 i0 94.276 132.874795417349 1188 49 97 13 43 1222 1 1177 Neobodo designis strain HFCC97 28S ribosomal RNA gene, partial sequence blastn 162373 1799 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Neobodonida   Neobodo Neobodo designis
10170158 10170158 PRJNA888821_P_NODE_1168_length_524_cov_8.869180_g1094_i0 PRJNA888821 1168 524 8.86918 46.4745032 Naegleria 5761 Heterolobosea other_Eukaryota 963 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g1094 i0 99.809 89.6049618320611 524 1 100 0 1 524 4830 5353 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 46953 968 0.994834710743802 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
11066106 11066106 PRJNA888821_P_NODE_1569_length_476_cov_0.977667_g1494_i0 PRJNA888821 1569 476 0.977667 4.65369492 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 880 0   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g1494 i0 100 51.0420168067227 476 0 100 0 1 476 1842 1367 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 24296 880 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
11066154 11066154 PRJNA888821_P_NODE_1889_length_449_cov_3.973404_g1814_i0 PRJNA888821 1889 449 3.973404 17.84058396 Trypanosoma theileri 67003 Euglenozoa other_Eukaryota 630 4.3899999999999986e-176   NTclustered gi|2026667530|dbj|LC618030.1| 67003 g1814 i0 91.904 149.846325167038 457 28 100 7 1 449 4803 4348 Trypanosoma theileri YMG-11 genes for 18S rRNA, ITS1, 5.8S rRNA, ITS2, 28S rRNA, ITS3, ITS4, ITS5, partial and complete sequence blastn 67281 630 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Trypanosoma Trypanosoma theileri
11066636 11066636 PRJNA888821_P_NODE_48089_length_211_cov_8.630435_g48006_i0 PRJNA888821 48089 211 8.630435 18.21021785 Allovahlkampfia sp. S35YCH 2919519 Heterolobosea other_Eukaryota 377 2.6900000000000003e-100   NTclustered gi|2199280130|dbj|LC683687.1| 2919519 g48006 i0 99.052 82.436018957346 211 1 100 1 1 211 1019 1228 Allovahlkampfia sp. S35YCH gene for 18S ribosomal RNA, partial sequence blastn 17394 377 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp. S35YCH
12721545 12721545 PRJNA888821_P_NODE_48750_length_209_cov_9.625000_g48667_i0 PRJNA888821 48750 209 9.625 20.11625 Allovahlkampfia 1217108 Heterolobosea other_Eukaryota 381 2.0599999999999996e-101   NTclustered gi|198250379|gb|EU696948.1| 556273 g48667 i0 99.522 99.6028708133971 209 1 100 0 1 209 1427 1219 Allovahlkampfia spelaea strain SK1 18S ribosomal RNA gene, complete sequence blastn 20817 381 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia spelaea
13616573 13616573 PRJNA888821_P_NODE_3711_length_366_cov_7.805461_g3630_i0 PRJNA888821 3711 366 7.805461 28.56798726 Tetramitus jugosus 166959 Heterolobosea other_Eukaryota 141 7.21e-29   NTclustered gi|2233316042|emb|OW569396.1| 166959 g3630 i0 84.106 26.3715846994536 151 19 40 4 2 147 21002 20852 Tetramitus jugosus genome assembly, organelle: mitochondrion blastn 9652 141 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Tetramitus Tetramitus jugosus
13616582 13616582 PRJNA888821_P_NODE_37511_length_245_cov_0.895349_g37428_i0 PRJNA888821 37511 245 0.895349 2.19360505 Naegleria gruberi 5762 Heterolobosea other_Eukaryota 372 1.49e-98   NTclustered gi|11466174|ref|NC_002573.1| 5762 g37428 i0 93.952 33.2040816326531 248 11 100 4 1 245 1601 1847 Naegleria gruberi mitochondrion, complete genome blastn 8135 372 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
13616600 13616600 PRJNA888821_P_NODE_38451_length_243_cov_0.905882_g38368_i0 PRJNA888821 38451 243 0.905882 2.20129326 Vahlkampfia avara 74082 Heterolobosea other_Eukaryota 449 6.65e-122   NTclustered gi|2874368078|gb|PQ819802.1| 74082 g38368 i0 100 27.2962962962963 243 0 100 0 1 243 61 303 Vahlkampfia avara strain CCAP 1588/1A small subunit ribosomal RNA gene and internal transcribed spacer 1, partial sequence blastn 6633 449 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
13995673 13995673 PRJNA888821_P_NODE_2691_length_405_cov_3.108434_g2612_i0 PRJNA888821 2691 405 3.108434 12.5891577 Leishmania 5658 Euglenozoa other_Eukaryota 348 4.42e-91   NTclustered gi|2593250474|emb|OY748421.1| 5660 g2612 i0 82.448 106.493827160494 433 43 100 22 1 405 990563 990990 Leishmania braziliensis isolate MHOM/BR/75/M2904 genome assembly, chromosome: 27 blastn 43130 348 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Leishmania Leishmania braziliensis
14890860 14890860 PRJNA888821_P_NODE_3432_length_375_cov_9.440397_g3351_i0 PRJNA888821 3432 375 9.440397 35.40148875 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 544 4.83e-150   NTclustered gi|2651357779|gb|PP174295.1| 1874883 g3351 i0 93.225 8.43733333333333 369 25 98 0 1 369 2072 2440 Allovahlkampfia sp. isolate P10 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 3164 544 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
14890889 14890889 PRJNA888821_P_NODE_35832_length_248_cov_11.262857_g35749_i0 PRJNA888821 35832 248 11.262857 27.93188536 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 233 7.459999999999999e-57   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g35749 i0 84.146 5.68951612903226 246 34 98 3 1 244 2788 2546 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 1411 233 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
16544459 16544459 PRJNA888821_P_NODE_4093_length_354_cov_8.879004_g4012_i0 PRJNA888821 4093 354 8.879004 31.43167416 Naegleria 5761 Heterolobosea other_Eukaryota 654 0   NTclustered gi|2618963742|gb|OR769034.1| 5762 g4012 i0 100 10.2090395480226 354 0 100 0 1 354 5442 5795 Naegleria gruberi strain NEG-M rDNA-containing extrachromosomal element genomic sequence; and 18S small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and 28S large subunit ribosomal RNA gene, complete sequence blastn 3614 654 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria gruberi
16544639 16544639 PRJNA888821_P_NODE_5433_length_322_cov_1.232932_g5351_i0 PRJNA888821 5433 322 1.232932 3.97004104 Vahlkampfia 5770 Heterolobosea other_Eukaryota 595 1.1099999999999995e-165   NTclustered gi|2283788571|gb|OP179657.1| 74082 g5351 i0 100 98.6366459627329 322 0 100 0 1 322 1266 945 Vahlkampfia avara isolate VA7 small subunit ribosomal RNA gene, partial sequence blastn 31761 595 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Vahlkampfia Vahlkampfia avara
19989460 19989460 PRJNA888821_P_NODE_3176_length_385_cov_1.371795_g3095_i0 PRJNA888821 3176 385 1.371795 5.28141075 Naegleria australiensis 51634 Heterolobosea other_Eukaryota 682 0   NTclustered gi|38606344|gb|AY376152.1| 51634 g3095 i0 98.701 18.2285714285714 385 4 100 1 1 385 13 396 Naegleria australiensis isolate 7857 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 7018 682 1 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
23815150 23815150 PRJNA888821_P_NODE_38719_length_242_cov_5.455621_g38636_i0 PRJNA888821 38719 242 5.455621 13.20260282 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 383 6.81e-102   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g38636 i0 96.17 59.4380165289256 235 7 97 2 9 242 2812 3045 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 14384 383 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
23815328 23815328 PRJNA888821_P_NODE_4979_length_331_cov_10.298450_g4897_i0 PRJNA888821 4979 331 10.29845 34.0878695 Allovahlkampfia sp. 1874883 Heterolobosea other_Eukaryota 556 5.42e-154   NTclustered gi|2651357784|gb|PP174299.1| 1874883 g4897 i0 96.979 63.0725075528701 331 10 100 0 1 331 3196 3526 Allovahlkampfia sp. isolate S28D2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 20877 556 1 Eukaryota Discoba   Heterolobosea     Acrasidae Allovahlkampfia Allovahlkampfia sp.
25088997 25088997 PRJNA888821_P_NODE_36200_length_248_cov_0.880000_g36117_i0 PRJNA888821 36200 248 0.88 2.1824 Trypanosomatidae 5654 Euglenozoa other_Eukaryota 130 7.019999999999998e-35   NR EPY22906.1 28005 g36117 i0 79 1.94758064516129 81 17 98 0 244 2 127 207 EPY22906.1 large subunit ribosomal protein LP0 [Strigomonas culicis] diamond 483 130 1 Eukaryota Discoba   Euglenozoa Kinetoplastea Trypanosomatida Trypanosomatidae Strigomonas Strigomonas culicis
25468282 25468282 PRJNA888821_P_NODE_1320_length_503_cov_2.546512_g1245_i0 PRJNA888821 1320 503 2.546512 12.80895536 Naegleria 5761 Heterolobosea other_Eukaryota 776 0   NTclustered gi|2476253407|gb|OQ627480.1| 51634 g1245 i0 94.611 19.8349900596421 501 27 99 0 3 503 4258 3758 Naegleria australiensis strain PP397 rDNA-containing extrachromosomal element genomic sequence; small subunit ribosomal RNA gene, internal transcribed spacer 1, 5.8S ribosomal RNA gene, internal transcribed spacer 2, and large subunit ribosomal RNA gene, complete sequence; and non-ribosomal sequence blastn 9977 782 0.9923273657289 Eukaryota Discoba   Heterolobosea     Vahlkampfiidae Naegleria Naegleria australiensis
32490133 32490133 PRJNA888821_P_NODE_35939_length_248_cov_5.862857_g35856_i0 PRJNA888821 35939 248 5.862857 14.53988536 Acrasis kona 1008807 Heterolobosea other_Eukaryota 68.2 3.92e-11   NR KAL0482300.1 1008807 g35856 i0 84.2 0.459677419354839 38 6 46 0 207 94 98 135 KAL0482300.1 3-hydroxyisobutyryl-CoA hydrolase [Acrasis kona] diamond 114 68.2 1 Eukaryota Discoba   Heterolobosea     Acrasidae Acrasis Acrasis kona

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;