RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA888821", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Methylomirabilota"

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tax_superkingdom 1

tax_phylum 1

  • Candidatus Methylomirabilota · 3 ✖

tax_clade 1

  • Bacteria candidate phyla · 3 ✖

bioproject 1

  • PRJNA888821 · 3 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26960362 26960362 PRJNA888821_P_NODE_19782_length_310_cov_2.654008_g19700_i0 PRJNA888821 19782 310 2.654008 8.2274248 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 68.6 2.76e-12   NR HWM79834.1 2072417 g19700 i0 61.2 1.42258064516129 49 19 47.4 0 148 2 69 117 HWM79834.1 NAD(P)-binding domain-containing protein [Candidatus Methylomirabilota bacterium] diamond 441 68.6 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28666234 28666234 PRJNA888821_P_NODE_28607_length_276_cov_3.758621_g28525_i0 PRJNA888821 28607 276 3.758621 10.37379396 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 124 9.07e-32   NR MCI0372097.1 2072417 g28525 i0 75.6 0.847826086956522 78 19 84.8 0 235 2 1 78 MCI0372097.1 nitronate monooxygenase [Candidatus Methylomirabilota bacterium] diamond 234 124 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium
28886991 28886991 PRJNA888821_P_NODE_22188_length_308_cov_8.451064_g22106_i0 PRJNA888821 22188 308 8.451064 26.02927712 Candidatus Methylomirabilota bacterium 2072417 Bacteria Bacteria 65.5 7.94e-10   NR HTN70540.1 2072417 g22106 i0 69.8 1.95779220779221 43 13 41.9 0 301 173 422 464 HTN70540.1 cysteine--tRNA ligase [Candidatus Methylomirabilota bacterium] diamond 603 65.5 1 Bacteria Bacteria candidate phyla   Candidatus Methylomirabilota         Candidatus Methylomirabilota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;