RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA888104", tax_kingdom = "Metazoa" and tax_phylum = "Mollusca"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mollusca · 2 ✖

tax_kingdom 1

  • Metazoa · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA888104 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
19093030 19093030 PRJNA888104_P_NODE_6535_length_381_cov_1.842949_g6466_i0 PRJNA888104 6535 381 1.842949 7.02163569 Metazoa 33208 Mollusca Mollusca 699 0   NTclustered gi|1928112764|gb|MT947788.1| 6523 g6466 i0 99.738 100.062992125984 381 1 100 0 1 381 350 730 Lymnaea stagnalis isolate Lsta_434075 hypothetical protein mRNA, complete cds blastn 38124 704 0.992897727272727 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda   Lymnaeidae Lymnaea Lymnaea stagnalis
31003388 31003388 PRJNA888104_P_NODE_14174_length_273_cov_1.377451_g14105_i0 PRJNA888104 14174 273 1.377451 3.76044123 Haliotis asinina 109174 Mollusca Mollusca 43.5 0.0267   NR XP_067657806.1 109174 g14105 i0 35.4 1.40659340659341 65 36 70.3 2 236 45 144 203 XP_067657806.1 uncharacterized protein [Haliotis asinina] diamond 384 43.5 1 Eukaryota Opisthokonta Metazoa Mollusca Gastropoda Lepetellida Haliotidae Haliotis Haliotis asinina

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;