contig_metadata
5 rows where bioproject = "PRJNA888104" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 1241517 | 1241517 | PRJNA888104_P_NODE_17781_length_244_cov_1.251429_g17712_i0 | PRJNA888104 | 17781 | 244 | 1.251429 | 3.05348676 | Gemmata | 113 | Bacteria | Bacteria | 315 | 2.5399999999999992e-81 | NTclustered | gi|1727537522|gb|CP042911.1| | 114 | g17712 | i0 | 90.164 | 330.614754098361 | 244 | 21 | 100 | 2 | 1 | 244 | 2941790 | 2942030 | Gemmata obscuriglobus strain DSM 5831 chromosome, complete genome | blastn | 80670 | 315 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmata | Gemmata obscuriglobus | |
| 8515128 | 8515128 | PRJNA888104_P_NODE_19307_length_235_cov_3.373494_g19238_i0 | PRJNA888104 | 19307 | 235 | 3.373494 | 7.9277109 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 298 | 2.45e-76 | NTclustered | gi|2874253853|emb|OY969909.1| | 1914239 | g19238 | i0 | 89.451 | 191.910638297872 | 237 | 23 | 100 | 2 | 1 | 235 | 2002078 | 2002314 | MAG: uncultured Gemmataceae bacterium isolate MFD01275.bin.c.1 genome assembly, chromosome: 1 | blastn | 45099 | 298 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 8515195 | 8515195 | PRJNA888104_P_NODE_22327_length_229_cov_1.787500_g22258_i0 | PRJNA888104 | 22327 | 229 | 1.7875 | 4.093375 | Stratiformator vulcanicus | 2527980 | Bacteria | Bacteria | 228 | 3.159999999999999e-55 | NTclustered | gi|1712491480|gb|CP036268.1| | 2527980 | g22258 | i0 | 85.202 | 33.0698689956332 | 223 | 31 | 97 | 2 | 1 | 223 | 3082604 | 3082384 | Stratiformator vulcanicus strain Pan189 chromosome | blastn | 7573 | 228 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Stratiformator | Stratiformator vulcanicus | |
| 22538885 | 22538885 | PRJNA888104_P_NODE_13798_length_276_cov_1.990338_g13729_i0 | PRJNA888104 | 13798 | 276 | 1.990338 | 5.49333288 | Frigoriglobus tundricola | 2774151 | Bacteria | Bacteria | 363 | 1.03e-95 | NTclustered | gi|1870286614|gb|CP053452.2| | 2774151 | g13729 | i0 | 90.323 | 91.8260869565217 | 279 | 24 | 100 | 2 | 1 | 276 | 4961413 | 4961691 | Frigoriglobus tundricola strain PL17 chromosome, complete genome | blastn | 25344 | 363 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Frigoriglobus | Frigoriglobus tundricola | |
| 32584956 | 32584956 | PRJNA888104_P_NODE_14019_length_274_cov_2.517073_g13950_i0 | PRJNA888104 | 14019 | 274 | 2.517073 | 6.89678002 | Verrucomicrobiales bacterium | 2026801 | Bacteria | Bacteria | 44.7 | 0.0109 | NR | NNE91183.1 | 2026801 | g13950 | i0 | 36.8 | 0.624087591240876 | 57 | 35 | 61.3 | 1 | 183 | 16 | 269 | 325 | NNE91183.1 tRNA guanosine(34) transglycosylase Tgt [Verrucomicrobiales bacterium] | diamond | 171 | 44.7 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiales bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;