RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA886442" and tax_phylum = "Rotifera"

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tax_superkingdom 1

tax_phylum 1

  • Rotifera · 4 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA886442 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26928920 26928920 PRJNA886442_P_NODE_10962_length_252_cov_0.871508_g10798_i0 PRJNA886442 10962 252 0.871508 2.19620016 Adineta ricciae 249248 Rotifera other_Eukaryota 170 4.11e-51   NR CAF1332432.1 249248 g10798 i0 97.6 2 84 2 100 0 1 252 131 214 CAF1332432.1 unnamed protein product, partial [Adineta ricciae] diamond 504 170 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
27213317 27213317 PRJNA886442_P_NODE_5722_length_322_cov_1.253012_g5558_i0 PRJNA886442 5722 322 1.253012 4.03469864 Brachionus plicatilis 10195 Rotifera other_Eukaryota 51.6 8.03e-6   NR RNA11463.1 10195 g5558 i0 61.9 0.782608695652174 42 16 39.1 0 4 129 61 102 RNA11463.1 cytosolic thioredoxin Trx1 [Brachionus plicatilis] diamond 252 51.6 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Ploima Brachionidae Brachionus Brachionus plicatilis
30434918 30434918 PRJNA886442_P_NODE_12333_length_248_cov_0.891429_g12169_i0 PRJNA886442 12333 248 0.891429 2.21074392 Adineta ricciae 249248 Rotifera other_Eukaryota 122 2.81e-30   NR CAF1487125.1 249248 g12169 i0 64.4 1.76612903225806 73 26 88.3 0 2 220 1338 1410 CAF1487125.1 unnamed protein product [Adineta ricciae] diamond 438 122 1 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Adinetida Adinetidae Adineta Adineta ricciae
31295631 31295631 PRJNA886442_P_NODE_1895_length_503_cov_1.134884_g1731_i0 PRJNA886442 1895 503 1.134884 5.70846652 Eurotatoria 2816136 Rotifera other_Eukaryota 107 1.1499999999999999e-23   NR CAF1407708.1 392033 g1731 i0 49.5 3.70974155069583 101 51 60.2 0 2 304 363 463 CAF1407708.1 unnamed protein product [Rotaria sordida] diamond 1866 108 0.990740740740741 Eukaryota Opisthokonta Metazoa Rotifera Eurotatoria Philodinida Philodinidae Rotaria Rotaria sordida

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;