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contig_metadata

28 rows where bioproject = "PRJNA886442" and tax_phylum = "Basidiomycota"

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tax_superkingdom 1

tax_phylum 1

  • Basidiomycota · 28 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA886442 · 28 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
861993 861993 PRJNA886442_P_NODE_4781_length_344_cov_3.317343_g4617_i0 PRJNA886442 4781 344 3.317343 11.41165992 Leucosporidium sp. AY30 662878 Fungi Fungi 499 9.67e-137   NTclustered gi|254927417|gb|GQ336996.1| 662878 g4617 i0 92.837 89.828488372093 349 17 100 8 1 344 5392 5737 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 30901 499 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
861999 861999 PRJNA886442_P_NODE_5041_length_338_cov_2.313208_g4877_i0 PRJNA886442 5041 338 2.313208 7.81864304 [Sporobolomyces] sp. 'boekhoutii' 167944 Fungi Fungi 507 5.6699999999999996e-139   NTclustered gi|33284934|dbj|AB066645.1| 167944 g4877 i0 93.605 100.736686390533 344 14 100 7 1 338 546 205 Sporobolomyces boekhoutii gene for 18S ribosomal RNA, complete sequence blastn 34049 507 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Sporidiobolales Sporidiobolaceae Sporobolomyces [Sporobolomyces] sp. 'boekhoutii'
2137293 2137293 PRJNA886442_P_NODE_1222_length_622_cov_3.697632_g1061_i0 PRJNA886442 1222 622 3.697632 22.99927104 Leucosporidium scottii 5278 Fungi Fungi 953 0   NTclustered gi|1358186634|gb|MH047191.1| 5278 g1061 i0 94.373 84.1961414790997 622 33 100 2 1 622 4407 3788 Leucosporidium scottii 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 52370 953 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium scottii
2517072 2517072 PRJNA886442_P_NODE_7462_length_290_cov_5.161290_g7298_i0 PRJNA886442 7462 290 5.16129 14.967741 Fungi 4751 Fungi Fungi 226 1.5e-54   NTclustered gi|1859735543|gb|MT644861.1| 112237 g7298 i0 92.949 64 156 9 54 2 2 157 5207 5360 Amylostereum laevigatum isolate DM1181 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 18560 228 0.991228070175439 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Stereaceae Amylostereum Amylostereum laevigatum
3412638 3412638 PRJNA886442_P_NODE_13763_length_245_cov_0.906977_g13599_i0 PRJNA886442 13763 245 0.906977 2.22209365 Guyanagaster necrorhizus 856835 Fungi Fungi 322 1.53e-83   NTclustered gi|2085323251|ref|XM_043188060.1| 1450536 g13599 i0 90.535 1.83265306122449 243 23 99 0 1 243 448 690 Guyanagaster necrorhizus MCA 3950 galactose oxidase (BT62DRAFT_948269), mRNA blastn 449 322 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Physalacriaceae Guyanagaster Guyanagaster necrorhizus
3412674 3412674 PRJNA886442_P_NODE_1563_length_552_cov_12.091858_g1400_i0 PRJNA886442 1563 552 12.091858 66.74705616 Proceropycnis pinicola 349962 Fungi Fungi 1020 0   NTclustered gi|1433537153|ref|NG_061045.1| 349962 g1400 i0 100 96.606884057971 552 0 100 0 1 552 586 1137 Proceropycnis pinicola AH 33906 18S rRNA gene, partial sequence; from TYPE material blastn 53327 1020 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Proceropycnis Proceropycnis pinicola
3412693 3412693 PRJNA886442_P_NODE_2903_length_416_cov_5.262391_g2739_i0 PRJNA886442 2903 416 5.262391 21.89154656 Chionosphaera cuniculicola 180810 Fungi Fungi 769 0   NTclustered gi|996412160|gb|KJ708369.1| 180810 g2739 i0 100 102.067307692308 416 0 100 0 1 416 482 67 Chionosphaera cuniculicola culture CBS:10065 18S ribosomal RNA gene, partial sequence blastn 42460 769 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Chionosphaeraceae Chionosphaera Chionosphaera cuniculicola
3412765 3412765 PRJNA886442_P_NODE_8443_length_276_cov_2.931034_g8279_i0 PRJNA886442 8443 276 2.931034 8.08965384 Atractocolax pulvinatus 2996750 Fungi Fungi 472 1.64e-128   NTclustered gi|2343988673|gb|OP890260.1| 2996750 g8279 i0 97.464 99.5398550724638 276 7 100 0 1 276 697 972 Atractocolax pulvinatus strain F3469 voucher RoKi800 from Germany small subunit ribosomal RNA gene, partial sequence blastn 27473 472 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Heterogastridiales   Atractocolax Atractocolax pulvinatus
4690233 4690233 PRJNA886442_P_NODE_1104_length_658_cov_7.441026_g944_i0 PRJNA886442 1104 658 7.441026 48.96195108 Cystobasidium laryngis 105772 Fungi Fungi 440 1.2e-118   NTclustered gi|1358186635|gb|MH047192.1| 105772 g944 i0 79.08 108.483282674772 674 116 100 23 1 658 4218 3554 Cystobasidium laryngis 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 28S ribosomal RNA gene, partial sequence blastn 71382 440 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cystobasidiales Cystobasidiaceae Cystobasidium Cystobasidium laryngis
6345522 6345522 PRJNA886442_P_NODE_9265_length_265_cov_1.302083_g9101_i0 PRJNA886442 9265 265 1.302083 3.45051995 Curvibasidium 256806 Fungi Fungi 414 2.68e-111   NTclustered gi|1102643723|gb|KY107293.1| 106008 g9101 i0 95.057 98.9622641509434 263 13 99 0 1 263 805 543 Curvibasidium cygneicollum culture CBS:8056 large subunit ribosomal RNA gene, partial sequence blastn 26225 414 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes     Curvibasidium Curvibasidium cygneicollum
7240019 7240019 PRJNA886442_P_NODE_15506_length_203_cov_5.623077_g15342_i0 PRJNA886442 15506 203 5.623077 11.41484631 Jianyunia sakaguchii 109612 Fungi Fungi 359 9.31e-95   NTclustered gi|3869214|dbj|AB001746.1| 109612 g15342 i0 98.529 100.56157635468 204 2 100 1 1 203 1767 1970 Bensingtonia sakaguchii gene for 18S rRNA, strain:OK255 blastn 20414 359 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Jianyuniaceae Jianyunia Jianyunia sakaguchii
8514791 8514791 PRJNA886442_P_NODE_14727_length_243_cov_0.917647_g14563_i0 PRJNA886442 14727 243 0.917647 2.22988221 Leucosporidium sp. AY30 662878 Fungi Fungi 427 3.11e-115   NTclustered gi|254927417|gb|GQ336996.1| 662878 g14563 i0 98.354 104.551440329218 243 4 100 0 1 243 4875 5117 Leucosporidium sp. AY30 18S ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and 26S ribosomal RNA gene, partial sequence blastn 25406 427 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes Leucosporidiales Leucosporidiaceae Leucosporidium Leucosporidium sp. AY30
10170070 10170070 PRJNA886442_P_NODE_7088_length_296_cov_2.874439_g6924_i0 PRJNA886442 7088 296 2.874439 8.50833944 Eukaryota 2759 Fungi Fungi 475 1.3799999999999998e-129   NTclustered gi|1102642593|gb|KY106163.1| 4996 g6924 i0 95.623 99.6824324324324 297 11 100 2 1 296 304 599 Bannozyma yamatoana culture CBS:7246 large subunit ribosomal RNA gene, partial sequence blastn 29506 475 1 Eukaryota Opisthokonta Fungi Basidiomycota Microbotryomycetes   Chrysozymaceae Bannozyma Bannozyma yamatoana
11065446 11065446 PRJNA886442_P_NODE_1729_length_526_cov_4.128035_g1565_i0 PRJNA886442 1729 526 4.128035 21.7134641 Chionosphaera cuniculicola 180810 Fungi Fungi 946 0   NTclustered gi|996412160|gb|KJ708369.1| 180810 g1565 i0 99.053 95.8041825095057 528 3 100 2 1 526 521 1048 Chionosphaera cuniculicola culture CBS:10065 18S ribosomal RNA gene, partial sequence blastn 50393 946 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricostilbomycetes Agaricostilbales Chionosphaeraceae Chionosphaera Chionosphaera cuniculicola
11065514 11065514 PRJNA886442_P_NODE_7649_length_288_cov_1.334884_g7485_i0 PRJNA886442 7649 288 1.334884 3.84446592 Agaricus bisporus 5341 Fungi Fungi 405 1.78e-108   NTclustered gi|597995930|ref|XM_007333329.1| 597362 g7485 i0 94.318 1.83680555555556 264 15 92 0 25 288 1 264 Agaricus bisporus var. burnettii JB137-S8 uncharacterized protein (AGABI1DRAFT_131735), partial mRNA blastn 529 405 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Agaricaceae Agaricus Agaricus bisporus
12720975 12720975 PRJNA886442_P_NODE_14670_length_243_cov_0.917647_g14506_i0 PRJNA886442 14670 243 0.917647 2.22988221 Malassezia 55193 Fungi Fungi 449 6.65e-122   NTclustered gi|915512619|gb|KP825402.1| 76775 g14506 i0 100 97.522633744856 243 0 100 0 1 243 12 254 Malassezia restricta strain ISOSEB46F 28S ribosomal RNA gene, partial sequence blastn 23698 449 1 Eukaryota Opisthokonta Fungi Basidiomycota Malasseziomycetes Malasseziales Malasseziaceae Malassezia Malassezia restricta
17440046 17440046 PRJNA886442_P_NODE_13994_length_244_cov_4.456140_g13830_i0 PRJNA886442 13994 244 4.45614 10.8729816 Proceropycnis pinicola 349962 Fungi Fungi 444 3.11e-120   NTclustered gi|1433537153|ref|NG_061045.1| 349962 g13830 i0 99.59 100.172131147541 244 0 99 1 1 243 100 343 Proceropycnis pinicola AH 33906 18S rRNA gene, partial sequence; from TYPE material blastn 24442 444 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Proceropycnis Proceropycnis pinicola
18713373 18713373 PRJNA886442_P_NODE_7855_length_284_cov_2.687204_g7691_i0 PRJNA886442 7855 284 2.687204 7.63165936 Cryptococcus deuterogattii 1859096 Fungi Fungi 63.9 1.21e-5   NTclustered gi|1350895623|gb|CP025773.1| 294750 g7691 i0 97.297 0.23943661971831 37 1 13 0 204 240 151 115 Cryptococcus deuterogattii R265 mitochondrion, complete genome blastn 68 63.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Tremellomycetes Tremellales Cryptococcaceae Cryptococcus Cryptococcus deuterogattii
19092921 19092921 PRJNA886442_P_NODE_15495_length_210_cov_9.204380_g15331_i0 PRJNA886442 15495 210 9.20438 19.329198 Hoehnelomycetaceae 34421 Fungi Fungi 385 1.5999999999999995e-102   NTclustered gi|1433537152|ref|NG_061044.1| 349961 g15331 i0 100 99.4809523809524 208 0 99 0 3 210 1581 1374 Basidiopycnis hyalina TUB F. Oberwinkler 44664 18S rRNA gene, partial sequence; from TYPE material blastn 20891 385 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Basidiopycnis Basidiopycnis hyalina
21263906 21263906 PRJNA886442_P_NODE_4457_length_353_cov_9.264286_g4293_i0 PRJNA886442 4457 353 9.264286 32.70292958 Entyloma ficariae 84747 Fungi Fungi 396 1.34e-105   NTclustered gi|1859735553|gb|MT644871.1| 84747 g4293 i0 87.017 102.263456090652 362 33 100 13 1 353 5613 5969 Entyloma ficariae isolate DM1162 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 36099 396 1 Eukaryota Opisthokonta Fungi Basidiomycota Exobasidiomycetes Entylomatales Entylomataceae Entyloma Entyloma ficariae
23814200 23814200 PRJNA886442_P_NODE_9119_length_267_cov_1.603093_g8955_i0 PRJNA886442 9119 267 1.603093 4.28025831 Opisthokonta 33154 Fungi Fungi 99.4 4.289999999999999e-23   NR KAI0066439.1 48021 g8955 i0 48.3 2.8988764044943802 87 45 97.8 0 266 6 14 100 KAI0066439.1 NAD-P-binding protein [Artomyces pyxidatus] diamond 774 100 0.994 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Russulales Auriscalpiaceae Artomyces Artomyces pyxidatus
24193000 24193000 PRJNA886442_P_NODE_5119_length_336_cov_1.281369_g4955_i0 PRJNA886442 5119 336 1.281369 4.30539984 Agaricomycetes 155619 Fungi Fungi 555 1.9799999999999998e-153   NTclustered gi|480327011|gb|JX507734.1| 40450 g4955 i0 96.429 105.675595238095 336 12 100 0 1 336 1440 1775 Piptoporus betulinus isolate 277 large subunit ribosomal RNA gene, partial sequence blastn 35507 555 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Polyporales Fomitopsidaceae Fomitopsis Fomitopsis betulina
26612101 26612101 PRJNA886442_P_NODE_10161_length_253_cov_2.444444_g9997_i0 PRJNA886442 10161 253 2.444444 6.18444332 Atractiella rhizophila 1938712 Fungi Fungi 79.3 4.42e-15   NR KAH8925836.1 1938712 g9997 i0 57.1 0.74703557312253 63 25 74.7 1 253 65 333 393 KAH8925836.1 hypothetical protein BT69DRAFT_1279357 [Atractiella rhizophila] diamond 189 79.3 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Atractiella Atractiella rhizophila
26897394 26897394 PRJNA886442_P_NODE_15141_length_242_cov_0.923077_g14977_i0 PRJNA886442 15141 242 0.923077 2.23384634 Cyphobasidiales sp. Tagirdzhanova- 2801448 Fungi Fungi 67 1.01e-10   NR CAD6579371.1 2778381 g14977 i0 43.4 0.942148760330578 76 43 94.2 0 3 230 190 265 CAD6579371.1 MAG: hypothetical protein CYPHOPRED_000869 [Cyphobasidiales sp. Tagirdzhanova-0007] diamond 228 67 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cyphobasidiales     Cyphobasidiales sp. Tagirdzhanova-0007
29897605 29897605 PRJNA886442_P_NODE_13431_length_246_cov_0.901734_g13267_i0 PRJNA886442 13431 246 0.901734 2.21826564 Atractiella rhizophila 1938712 Fungi Fungi 133 1.6299999999999999e-34   NR KAH8921326.1 1938712 g13267 i0 80.5 1 82 16 100 0 246 1 63 144 KAH8921326.1 protein disulfide isomerase [Atractiella rhizophila] diamond 246 133 1 Eukaryota Opisthokonta Fungi Basidiomycota Atractiellomycetes Atractiellales Hoehnelomycetaceae Atractiella Atractiella rhizophila
30245205 30245205 PRJNA886442_P_NODE_2692_length_430_cov_1.425770_g2528_i0 PRJNA886442 2692 430 1.42577 6.130811 Mycena crocata 220801 Fungi Fungi 85.9 1.77e-17   NR KAJ7182922.1 220801 g2528 i0 60.7 0.837209302325581 61 24 42.6 0 248 430 42 102 KAJ7182922.1 Caleosin related protein-domain-containing protein [Mycena crocata] diamond 360 85.9 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Agaricales Mycenaceae Mycena Mycena crocata
31414323 31414323 PRJNA886442_P_NODE_12756_length_247_cov_0.896552_g12592_i0 PRJNA886442 12756 247 0.896552 2.21448344 Cyphobasidiales sp. Tagirdzhanova- 2801448 Fungi Fungi 67 1.1e-10   NR CAD6566822.1 2778381 g12592 i0 66.7 0.510121457489879 42 14 51 0 115 240 257 298 CAD6566822.1 MAG: hypothetical protein CYPHOPRED_001131 [Cyphobasidiales sp. Tagirdzhanova-0007] diamond 126 67 1 Eukaryota Opisthokonta Fungi Basidiomycota Cystobasidiomycetes Cyphobasidiales     Cyphobasidiales sp. Tagirdzhanova-0007
32078563 32078563 PRJNA886442_P_NODE_7678_length_287_cov_2.369159_g7514_i0 PRJNA886442 7678 287 2.369159 6.79948633 Ceratobasidium sp. 423 2600206 Fungi Fungi 43.5 0.0333   NR KAG8730680.1 2600206 g7514 i0 35.3 0.710801393728223 68 44 71.1 0 216 13 492 559 KAG8730680.1 hypothetical protein FRC11_006108, partial [Ceratobasidium sp. 423] diamond 204 43.5 1 Eukaryota Opisthokonta Fungi Basidiomycota Agaricomycetes Cantharellales Ceratobasidiaceae Ceratobasidium Ceratobasidium sp. 423

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;