contig_metadata
11 rows where bioproject = "PRJNA886442", tax_kingdom = "Bacillati" and tax_phylum = "Bacillota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 3412712 | 3412712 | PRJNA886442_P_NODE_4343_length_357_cov_1.478873_g4179_i0 | PRJNA886442 | 4343 | 357 | 1.478873 | 5.27957661 | Clostridium intestinale | 36845 | Bacteria | Bacteria | 654 | 0 | NTclustered | gi|1880427247|gb|CP059378.1| | 36845 | g4179 | i0 | 99.72 | 914.703081232493 | 357 | 1 | 100 | 0 | 1 | 357 | 233305 | 233661 | Clostridium intestinale strain Lx1 chromosome, complete genome | blastn | 326549 | 654 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Clostridiaceae | Clostridium | Clostridium intestinale | ||
| 6345489 | 6345489 | PRJNA886442_P_NODE_4245_length_360_cov_1.616725_g4081_i0 | PRJNA886442 | 4245 | 360 | 1.616725 | 5.82021 | Lacticaseibacillus | 2759736 | Bacteria | Bacteria | 660 | 0 | NTclustered | gi|449330456|gb|KC161263.1| | 1582 | g4081 | i0 | 99.722 | 472 | 360 | 1 | 100 | 0 | 1 | 360 | 429 | 70 | Lactobacillus casei strain 431 23S ribosomal RNA gene, partial sequence | blastn | 169920 | 660 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Lactobacillales | Lactobacillaceae | Lacticaseibacillus | Lacticaseibacillus casei | ||
| 7619462 | 7619462 | PRJNA886442_P_NODE_10846_length_252_cov_0.871508_g10682_i0 | PRJNA886442 | 10846 | 252 | 0.871508 | 2.19620016 | Staphylococcus | 1279 | Bacteria | Bacteria | 466 | 6.89e-127 | NTclustered | gi|1928723242|gb|CP042341.1| | 29388 | g10682 | i0 | 100 | 521.007936507937 | 252 | 0 | 100 | 0 | 1 | 252 | 783293 | 783544 | Staphylococcus capitis strain BN2 chromosome, complete genome | blastn | 131294 | 466 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Staphylococcaceae | Staphylococcus | Staphylococcus capitis | ||
| 11065397 | 11065397 | PRJNA886442_P_NODE_12269_length_248_cov_1.588571_g12105_i0 | PRJNA886442 | 12269 | 248 | 1.588571 | 3.93965608 | Novisyntrophococcus fermenticellae | 2068655 | Bacteria | Bacteria | 326 | 1.2e-84 | NTclustered | gi|2052596054|gb|CP076458.1| | 2068655 | g12105 | i0 | 90.323 | 428.020161290323 | 248 | 24 | 100 | 0 | 1 | 248 | 654265 | 654512 | Novisyntrophococcus fermenticellae strain JN500902 chromosome, complete genome | blastn | 106149 | 326 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Lachnospirales | Lachnospiraceae | Novisyntrophococcus | Novisyntrophococcus fermenticellae | ||
| 13615456 | 13615456 | PRJNA886442_P_NODE_12051_length_249_cov_0.886364_g11887_i0 | PRJNA886442 | 12051 | 249 | 0.886364 | 2.20704636 | Thermicanus aegyptius | 94009 | Bacteria | Bacteria | 163 | 4.5499999999999995e-45 | NR | WP_005583113.1 | 94009 | g11887 | i0 | 95.2 | 1.98795180722892 | 83 | 4 | 100 | 0 | 1 | 249 | 470 | 552 | WP_005583113.1 ATP-dependent zinc metalloprotease FtsH [Thermicanus aegyptius] | diamond | 495 | 163 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillales Family X. Incertae Sedis | Thermicanus | Thermicanus aegyptius | ||
| 13995373 | 13995373 | PRJNA886442_P_NODE_7791_length_285_cov_2.363208_g7627_i0 | PRJNA886442 | 7791 | 285 | 2.363208 | 6.7351428 | Aeribacillus | 1055323 | Bacteria | Bacteria | 279 | 1.11e-70 | NTclustered | gi|1229099743|gb|CP017703.1| | 33936 | g7627 | i0 | 85.985 | 733.315789473684 | 264 | 33 | 92 | 4 | 24 | 285 | 525613 | 525352 | Aeribacillus pallidus strain KCTC3564 chromosome, complete genome | blastn | 208995 | 279 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillaceae | Aeribacillus | Aeribacillus pallidus | ||
| 23814015 | 23814015 | PRJNA886442_P_NODE_10379_length_253_cov_0.866667_g10215_i0 | PRJNA886442 | 10379 | 253 | 0.866667 | 2.19266751 | Paraclostridium bifermentans | 1490 | Bacteria | Bacteria | 52.8 | 0.023 | NTclustered | gi|2091226359|gb|CP079737.1| | 1490 | g10215 | i0 | 96.774 | 0.367588932806324 | 31 | 1 | 12 | 0 | 116 | 146 | 1822537 | 1822507 | Paraclostridium bifermentans strain DSM 14991 chromosome, complete genome | blastn | 93 | 52.8 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Peptostreptococcales | Peptostreptococcaceae | Paraclostridium | Paraclostridium bifermentans | ||
| 25468113 | 25468113 | PRJNA886442_P_NODE_11420_length_250_cov_1.887006_g11256_i0 | PRJNA886442 | 11420 | 250 | 1.887006 | 4.717515 | Ethanoligenens | 253238 | Bacteria | Bacteria | 424 | 4.16e-114 | NTclustered | gi|470487490|ref|NR_076821.1| | 253239 | g11256 | i0 | 97.2 | 295.164 | 250 | 7 | 100 | 0 | 1 | 250 | 1705 | 1456 | Ethanoligenens harbinense strain YUAN-3 23S ribosomal RNA gene, complete sequence | blastn | 73791 | 424 | 1 | Bacteria | Bacillati | Bacillota | Clostridia | Eubacteriales | Oscillospiraceae | Ethanoligenens | Ethanoligenens harbinense | ||
| 29108208 | 29108208 | PRJNA886442_P_NODE_2848_length_420_cov_1.573487_g2684_i0 | PRJNA886442 | 2848 | 420 | 1.573487 | 6.6086454 | Hydrogenibacillus schlegelii | 1484 | Bacteria | Bacteria | 46.6 | 0.0108 | NR | WP_273000906.1 | 1484 | g2684 | i0 | 48.1 | 0.771428571428571 | 54 | 17 | 38.6 | 2 | 6 | 167 | 160 | 202 | WP_273000906.1 bifunctional metallophosphatase/5'-nucleotidase, partial [Hydrogenibacillus schlegelii] | diamond | 324 | 46.6 | 1 | Bacteria | Bacillati | Bacillota | Bacilli | Bacillales | Bacillales Family X. Incertae Sedis | Hydrogenibacillus | Hydrogenibacillus schlegelii | ||
| 31604136 | 31604136 | PRJNA886442_P_NODE_7776_length_286_cov_1.098592_g7612_i0 | PRJNA886442 | 7776 | 286 | 1.098592 | 3.14197312 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 56.6 | 8.41e-8 | NR | HOJ49100.1 | 1879010 | g7612 | i0 | 51.7 | 1.81468531468531 | 58 | 28 | 60.8 | 0 | 5 | 178 | 54 | 111 | HOJ49100.1 hypothetical protein [Bacillota bacterium] | diamond | 519 | 56.6 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium | ||||||
| 31983598 | 31983598 | PRJNA886442_P_NODE_6438_length_308_cov_1.327660_g6274_i0 | PRJNA886442 | 6438 | 308 | 1.32766 | 4.0891928 | Bacillota bacterium | 1879010 | Bacteria | Bacteria | 62 | 1.62e-9 | NR | MBI2914668.1 | 1879010 | g6274 | i0 | 37.6 | 0.905844155844156 | 93 | 55 | 90.6 | 1 | 295 | 17 | 55 | 144 | MBI2914668.1 LysM peptidoglycan-binding domain-containing protein [Bacillota bacterium] | diamond | 279 | 62 | 1 | Bacteria | Bacillati | Bacillota | Bacillota bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;