RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA886442", tax_kingdom = "Bacillati" and tax_phylum = "Armatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Armatimonadota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA886442 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27505925 27505925 PRJNA886442_P_NODE_13623_length_245_cov_1.360465_g13459_i0 PRJNA886442 13623 245 1.360465 3.33313925 FCB group 1783270 Bacteria Bacteria 139 3.0600000000000004e-36   NR CAA9220797.1 157466 g13459 i0 86.3 37.2612244897959 80 11 98 0 244 5 453 532 CAA9220797.1 Lead, cadmium, zinc and mercury transporting ATPase; Copper-translocating P-type ATPase [uncultured Armatimonadetes bacterium] diamond 9129 140 0.992857142857143 Bacteria   Bacillati Armatimonadota         uncultured Armatimonadetes bacterium
28697837 28697837 PRJNA886442_P_NODE_14927_length_242_cov_1.165680_g14763_i0 PRJNA886442 14927 242 1.16568 2.8209456 Armatimonadota bacterium 2033014 Bacteria Bacteria 75.9 5.49e-14   NR MBA3727416.1 2033014 g14763 i0 56.6 0.65702479338843 53 23 65.7 0 163 5 289 341 MBA3727416.1 hypothetical protein [Armatimonadota bacterium] diamond 159 75.9 1 Bacteria   Bacillati Armatimonadota         Armatimonadota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;