contig_metadata
24 rows where bioproject = "PRJNA886442" and tax_clade = "PVC group"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 862070 | 862070 | PRJNA886442_P_NODE_9181_length_266_cov_1.616580_g9017_i0 | PRJNA886442 | 9181 | 266 | 1.61658 | 4.3001028 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 377 | 3.53e-100 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g9017 | i0 | 94.332 | 110.582706766917 | 247 | 12 | 92 | 2 | 11 | 255 | 1154990 | 1155236 | Planctomyces sp. SH-PL62, complete genome | blastn | 29415 | 377 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 2137417 | 2137417 | PRJNA886442_P_NODE_6302_length_310_cov_2.075949_g6138_i0 | PRJNA886442 | 6302 | 310 | 2.075949 | 6.4354419 | Pedosphaera parvula | 1032527 | Bacteria | Bacteria | 296 | 1.21e-75 | NTclustered | gi|183579829|emb|AM905426.1| | 320771 | g6138 | i0 | 87.795 | 136.912903225806 | 254 | 29 | 82 | 2 | 1 | 253 | 1806 | 1554 | Bacterium Ellin514 23S rRNA gene, isolate Ellin514 | blastn | 42443 | 296 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Pedosphaerae | Pedosphaerales | Pedosphaeraceae | Pedosphaera | Pedosphaera parvula | |
| 3793439 | 3793439 | PRJNA886442_P_NODE_9823_length_258_cov_1.264865_g9659_i0 | PRJNA886442 | 9823 | 258 | 1.264865 | 3.2633517 | Opitutaceae | 134623 | Bacteria | Bacteria | 211 | 3.66e-50 | NTclustered | gi|2724066732|gb|CP109796.1| | 1184151 | g9659 | i0 | 81.928 | 55.7984496124031 | 249 | 45 | 97 | 0 | 1 | 249 | 6443875 | 6444123 | Termitidicoccus mucosus strain TSB47 chromosome, complete genome | blastn | 14396 | 213 | 0.990610328638498 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Opitutia | Opitutales | Opitutaceae | Termitidicoccus | Termitidicoccus mucosus | |
| 4690388 | 4690388 | PRJNA886442_P_NODE_6524_length_307_cov_1.000000_g6360_i0 | PRJNA886442 | 6524 | 307 | 1 | 3.07 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 429 | 1.13e-115 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g6360 | i0 | 93.151 | 143.543973941368 | 292 | 20 | 95 | 0 | 7 | 298 | 983 | 692 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 44068 | 429 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 10170047 | 10170047 | PRJNA886442_P_NODE_3448_length_390_cov_1.230284_g3284_i0 | PRJNA886442 | 3448 | 390 | 1.230284 | 4.7981076 | Luteolibacter | 518753 | Bacteria | Bacteria | 676 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g3284 | i0 | 97.949 | 284.34358974359 | 390 | 8 | 100 | 0 | 1 | 390 | 3805749 | 3805360 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 110894 | 676 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 11065433 | 11065433 | PRJNA886442_P_NODE_14589_length_243_cov_0.917647_g14425_i0 | PRJNA886442 | 14589 | 243 | 0.917647 | 2.22988221 | Planctomycetota bacterium | 2026780 | Bacteria | Bacteria | 147 | 2.86e-40 | NR | RIK83591.1 | 2026780 | g14425 | i0 | 86.3 | 3.95061728395062 | 80 | 10 | 98.8 | 1 | 2 | 241 | 223 | 301 | RIK83591.1 MAG: gfo/Idh/MocA family oxidoreductase, partial [Planctomycetota bacterium] | diamond | 960 | 147 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetota bacterium | |||||
| 11065507 | 11065507 | PRJNA886442_P_NODE_6669_length_304_cov_1.012987_g6505_i0 | PRJNA886442 | 6669 | 304 | 1.012987 | 3.07948048 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 449 | 8.599999999999998e-122 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g6505 | i0 | 93.96 | 225.585526315789 | 298 | 16 | 97 | 1 | 4 | 299 | 715 | 418 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 68578 | 449 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 13615550 | 13615550 | PRJNA886442_P_NODE_4251_length_360_cov_1.170732_g4087_i0 | PRJNA886442 | 4251 | 360 | 1.170732 | 4.2146352 | uncultured Verrucomicrobiae bacterium | 412056 | Bacteria | Bacteria | 346 | 1.4e-90 | NTclustered | gi|2874253690|emb|OY969416.1| | 412056 | g4087 | i0 | 85.088 | 75.1694444444445 | 342 | 48 | 94 | 3 | 21 | 360 | 1315912 | 1316252 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD04967.bin.1.157 genome assembly, chromosome: 1 | blastn | 27061 | 346 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 15269408 | 15269408 | PRJNA886442_P_NODE_4792_length_344_cov_1.726937_g4628_i0 | PRJNA886442 | 4792 | 344 | 1.726937 | 5.94066328 | Verrucomicrobiota | 74201 | Bacteria | Bacteria | 424 | 5.9899999999999996e-114 | NTclustered | gi|2874253768|emb|OY969715.1| | 412056 | g4628 | i0 | 90.154 | 148.5 | 325 | 32 | 94 | 0 | 6 | 330 | 914735 | 915059 | MAG: uncultured Verrucomicrobiae bacterium isolate MFD01916.bin.1.1 genome assembly, chromosome: 1 | blastn | 51084 | 427 | 0.992974238875878 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | uncultured Verrucomicrobiae bacterium | ||||
| 17818956 | 17818956 | PRJNA886442_P_NODE_10914_length_252_cov_0.871508_g10750_i0 | PRJNA886442 | 10914 | 252 | 0.871508 | 2.19620016 | Planctomycetia | 203683 | Bacteria | Bacteria | 305 | 1.59e-78 | NTclustered | gi|2874253948|emb|OY970273.1| | 100233 | g10750 | i0 | 91.818 | 193.384920634921 | 220 | 16 | 87 | 2 | 34 | 252 | 2623267 | 2623049 | MAG: uncultured Planctomycetaceae bacterium isolate MFD09495.bin.c.1 genome assembly, chromosome: 1 | blastn | 48733 | 305 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | uncultured Planctomycetaceae bacterium | ||
| 17819019 | 17819019 | PRJNA886442_P_NODE_4174_length_362_cov_2.930796_g4010_i0 | PRJNA886442 | 4174 | 362 | 2.930796 | 10.60948152 | Planctomycetia | 203683 | Bacteria | Bacteria | 603 | 7.559999999999999e-168 | NTclustered | gi|1133581311|gb|CP019082.1| | 1387353 | g4010 | i0 | 96.694 | 309.229281767956 | 363 | 10 | 100 | 2 | 1 | 362 | 122641 | 122280 | Paludisphaera borealis strain PX4 chromosome, complete genome | blastn | 111941 | 603 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Paludisphaera | Paludisphaera borealis | |
| 18713348 | 18713348 | PRJNA886442_P_NODE_5675_length_323_cov_1.248000_g5511_i0 | PRJNA886442 | 5675 | 323 | 1.248 | 4.03104 | uncultured Gemmataceae bacterium | 1914239 | Bacteria | Bacteria | 414 | 3.36e-111 | NTclustered | gi|2874253749|emb|OY969623.1| | 1914239 | g5511 | i0 | 93.238 | 125.074303405573 | 281 | 19 | 87 | 0 | 43 | 323 | 7052359 | 7052639 | MAG: uncultured Gemmataceae bacterium isolate MFD06742.bin.c.1 genome assembly, chromosome: 1 | blastn | 40399 | 414 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | uncultured Gemmataceae bacterium | ||
| 19988586 | 19988586 | PRJNA886442_P_NODE_616_length_881_cov_3.146040_g466_i0 | PRJNA886442 | 616 | 881 | 3.14604 | 27.7166124 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 1343 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g466 | i0 | 94.131 | 291.05788876277 | 886 | 47 | 100 | 3 | 1 | 881 | 3804241 | 3805126 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 256422 | 1343 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 21263869 | 21263869 | PRJNA886442_P_NODE_1617_length_545_cov_1.889831_g1454_i0 | PRJNA886442 | 1617 | 545 | 1.889831 | 10.29957895 | Planctomyces sp. SH-PL62 | 1636152 | Bacteria | Bacteria | 784 | 0 | NTclustered | gi|1015454008|gb|CP011273.1| | 1636152 | g1454 | i0 | 92.687 | 120.133944954128 | 547 | 35 | 100 | 5 | 1 | 545 | 1155190 | 1155733 | Planctomyces sp. SH-PL62, complete genome | blastn | 65473 | 784 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetales | Planctomycetaceae | Planctomyces | Planctomyces sp. SH-PL62 | |
| 21263958 | 21263958 | PRJNA886442_P_NODE_8157_length_280_cov_1.507246_g7993_i0 | PRJNA886442 | 8157 | 280 | 1.507246 | 4.2202888 | uncultured Verrucomicrobiota bacterium | 156588 | Bacteria | Bacteria | 302 | 2.32e-77 | NTclustered | gi|226525339|gb|FJ872375.1| | 156588 | g7993 | i0 | 88.235 | 185.45 | 255 | 26 | 90 | 4 | 1 | 251 | 26916 | 27170 | Uncultured Verrucomicrobia bacterium clone 286 genomic sequence | blastn | 51926 | 302 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 21263959 | 21263959 | PRJNA886442_P_NODE_8177_length_280_cov_1.275362_g8013_i0 | PRJNA886442 | 8177 | 280 | 1.275362 | 3.5710136 | Candidatus Methylacidiphilales bacterium | 2720631 | Bacteria | Bacteria | 181 | 4.209999999999999e-55 | NR | HEY8965962.1 | 2720631 | g8013 | i0 | 91.4 | 0.996428571428571 | 93 | 8 | 99.6 | 0 | 280 | 2 | 38 | 130 | HEY8965962.1 MBL fold metallo-hydrolase [Candidatus Methylacidiphilales bacterium] | diamond | 279 | 181 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Candidatus Methylacidiphilales bacterium | |||
| 22538698 | 22538698 | PRJNA886442_P_NODE_2618_length_435_cov_1.370166_g2454_i0 | PRJNA886442 | 2618 | 435 | 1.370166 | 5.9602221 | Luteolibacter luteus | 2728835 | Bacteria | Bacteria | 726 | 0 | NTclustered | gi|1835317346|gb|CP051774.1| | 2728835 | g2454 | i0 | 96.782 | 263.889655172414 | 435 | 14 | 100 | 0 | 1 | 435 | 3803957 | 3803523 | Luteolibacter luteus strain G-1-1-1 chromosome, complete genome | blastn | 114792 | 726 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiales | Verrucomicrobiaceae | Luteolibacter | Luteolibacter luteus | |
| 22538787 | 22538787 | PRJNA886442_P_NODE_9338_length_264_cov_1.476440_g9174_i0 | PRJNA886442 | 9338 | 264 | 1.47644 | 3.8978016 | Chthoniobacter flavus | 191863 | Bacteria | Bacteria | 411 | 3.4499999999999996e-110 | NTclustered | gi|183579828|emb|AM905425.1| | 497964 | g9174 | i0 | 94.737 | 31.4090909090909 | 266 | 10 | 100 | 4 | 1 | 264 | 1123 | 1386 | Chthoniobacter flavus 23S rRNA gene, strain Ellin428 | blastn | 8292 | 411 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Spartobacteria | Chthoniobacterales | Chthoniobacteraceae | Chthoniobacter | Chthoniobacter flavus | |
| 24192988 | 24192988 | PRJNA886442_P_NODE_2479_length_445_cov_1.376344_g2315_i0 | PRJNA886442 | 2479 | 445 | 1.376344 | 6.1247308 | Chthoniobacter | 295577 | Bacteria | Bacteria | 778 | 0 | NTclustered | gi|226525288|gb|FJ872373.1| | 156588 | g2315 | i0 | 98.206 | 242.011235955056 | 446 | 6 | 100 | 2 | 1 | 445 | 17999 | 17555 | Uncultured Verrucomicrobia bacterium clone 118 genomic sequence | blastn | 107695 | 784 | 0.99234693877551 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | uncultured Verrucomicrobiota bacterium | |||||
| 28003241 | 28003241 | PRJNA886442_P_NODE_3585_length_385_cov_1.000000_g3421_i0 | PRJNA886442 | 3585 | 385 | 1 | 3.85 | Tautonia sociabilis | 2080755 | Bacteria | Bacteria | 121 | 4.89e-31 | NR | WP_126726219.1 | 2080755 | g3421 | i0 | 65.2 | 0.716883116883117 | 92 | 32 | 71.7 | 0 | 385 | 110 | 180 | 271 | WP_126726219.1 class I SAM-dependent methyltransferase [Tautonia sociabilis] | diamond | 276 | 121 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Isosphaerales | Isosphaeraceae | Tautonia | Tautonia sociabilis | |
| 30750649 | 30750649 | PRJNA886442_P_NODE_2354_length_455_cov_1.225131_g2190_i0 | PRJNA886442 | 2354 | 455 | 1.225131 | 5.57434605 | Gemmataceae bacterium | 2052164 | Bacteria | Bacteria | 120 | 1.63e-29 | NR | HJZ92462.1 | 2052164 | g2190 | i0 | 45.7 | 1.99120879120879 | 151 | 66 | 99.6 | 5 | 1 | 453 | 105 | 239 | HJZ92462.1 aldose epimerase family protein [Gemmataceae bacterium] | diamond | 906 | 120 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Gemmatales | Gemmataceae | Gemmataceae bacterium | ||
| 30971869 | 30971869 | PRJNA886442_P_NODE_8794_length_272_cov_0.969849_g8630_i0 | PRJNA886442 | 8794 | 272 | 0.969849 | 2.63798928 | Verrucomicrobiia bacterium | 2499141 | Bacteria | Bacteria | 71.6 | 3.29e-12 | NR | MBT8036538.1 | 2499141 | g8630 | i0 | 40.3 | 0.794117647058823 | 72 | 43 | 79.4 | 0 | 57 | 272 | 1 | 72 | MBT8036538.1 CDP-glycerol glycerophosphotransferase family protein [Verrucomicrobiia bacterium] | diamond | 216 | 71.6 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Verrucomicrobiia | Verrucomicrobiia bacterium | ||||
| 31509346 | 31509346 | PRJNA886442_P_NODE_14096_length_244_cov_0.912281_g13932_i0 | PRJNA886442 | 14096 | 244 | 0.912281 | 2.22596564 | Candidatus Methylacidiphilales bacterium | 2720631 | Bacteria | Bacteria | 154 | 8.929999999999999e-45 | NR | HEY8966496.1 | 2720631 | g13932 | i0 | 96.2 | 1.95491803278689 | 79 | 3 | 97.1 | 0 | 242 | 6 | 61 | 139 | HEY8966496.1 signal peptide peptidase SppA [Candidatus Methylacidiphilales bacterium] | diamond | 477 | 154 | 1 | Bacteria | PVC group | Pseudomonadati | Verrucomicrobiota | Methylacidiphilae | Methylacidiphilales | Candidatus Methylacidiphilales bacterium | |||
| 32836558 | 32836558 | PRJNA886442_P_NODE_7800_length_285_cov_1.839623_g7636_i0 | PRJNA886442 | 7800 | 285 | 1.839623 | 5.24292555 | Planctomycetia bacterium | 2052181 | Bacteria | Bacteria | 82 | 4.49e-16 | NR | NBO92887.1 | 2052181 | g7636 | i0 | 49.5 | 1.94736842105263 | 95 | 47 | 98.9 | 1 | 2 | 283 | 182 | 276 | NBO92887.1 zinc-binding dehydrogenase [Planctomycetia bacterium] | diamond | 555 | 82 | 1 | Bacteria | PVC group | Pseudomonadati | Planctomycetota | Planctomycetia | Planctomycetia bacterium |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;