RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA886442", tax_clade = "Opisthokonta" and tax_phylum = "Cnidaria"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Cnidaria · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA886442 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
2137360 2137360 PRJNA886442_P_NODE_2382_length_452_cov_2.928760_g2218_i0 PRJNA886442 2382 452 2.92876 13.2379952 Distichoptilum gracile 361155 Cnidaria other_Eukaryota 213 1.9e-50   NTclustered gi|2160785900|gb|OL741694.1| 361155 g2218 i0 87.634 60.4424778761062 186 20 41 1 32 217 4565 4383 Distichoptilum gracile voucher NMS.Z.2019.25.2 small subunit ribosomal RNA gene, partial sequence; internal transcribed spacer 1, 5.8S ribosomal RNA gene, and internal transcribed spacer 2, complete sequence; and large subunit ribosomal RNA gene, partial sequence blastn 27320 213 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleralcyonacea Protoptilidae Distichoptilum Distichoptilum gracile
32395123 32395123 PRJNA886442_P_NODE_1099_length_660_cov_2.008518_g939_i0 PRJNA886442 1099 660 2.008518 13.2562188 Acropora muricata 159855 Cnidaria other_Eukaryota 48.1 0.0161   NR XP_067016032.1 159855 g939 i0 59.6 0.959090909090909 52 21 23.6 0 657 502 602 653 XP_067016032.1 heat shock cognate 71 kDa protein-like [Acropora muricata] diamond 633 48.1 1 Eukaryota Opisthokonta Metazoa Cnidaria Anthozoa Scleractinia Acroporidae Acropora Acropora muricata

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;