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contig_metadata

16 rows where bioproject = "PRJNA886442" and tax_clade = "Amoebozoa"

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tax_phylum 2

analysis 2

tax_superkingdom 1

tax_clade 1

  • Amoebozoa · 16 ✖

bioproject 1

  • PRJNA886442 · 16 ✖

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3412770 3412770 PRJNA886442_P_NODE_8743_length_272_cov_2.331658_g8579_i0 PRJNA886442 8743 272 2.331658 6.34210976 Amaurochaete atra 3090879 Evosea other_Eukaryota 372 1.69e-98   NTclustered gi|2616764718|gb|OR769487.1| 3090879 g8579 i0 93.05 14.3308823529412 259 10 95 8 1 259 251 1 Amaurochaete atra voucher MYX16954 small subunit ribosomal RNA gene, partial sequence; mitochondrial blastn 3898 372 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Amaurochaete Amaurochaete atra
5965142 5965142 PRJNA886442_P_NODE_1345_length_594_cov_18.028791_g1182_i0 PRJNA886442 1345 594 18.028791 107.09101854 Stemonitis flavogenita 137617 Evosea other_Eukaryota 778 0   NTclustered gi|381139236|emb|HE655043.1| 137617 g1182 i0 90.484 70.5858585858586 599 44 100 11 1 594 1835 1245 Stemonitis flavogenita partial 28S rRNA gene, strain ATCC 24714 blastn 41928 778 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitis Stemonitis flavogenita
7240123 7240123 PRJNA886442_P_NODE_8306_length_278_cov_1.951220_g8142_i0 PRJNA886442 8306 278 1.95122 5.4243916 Didymium iridis 5793 Evosea other_Eukaryota 171 6.77e-38   NTclustered gi|2687|emb|X60210.1| 5793 g8142 i0 85.38 5.24460431654676 171 18 61 5 1 170 920 1084 D.iridis LSU rRNA gene blastn 1458 171 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
7619548 7619548 PRJNA886442_P_NODE_86_length_1967_cov_37.919219_g47_i0 PRJNA886442 86 1967 37.919219 745.87103773 Didymium 5792 Evosea other_Eukaryota 1024 0   NTclustered gi|2687|emb|X60210.1| 5793 g47 i0 81.563 16.9089984748348 1318 174 91 48 660 1960 1218 2483 D.iridis LSU rRNA gene blastn 33260 1026 0.998050682261209 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Didymiaceae Didymium Didymium iridis
11065447 11065447 PRJNA886442_P_NODE_1749_length_523_cov_16.611111_g1585_i0 PRJNA886442 1749 523 16.611111 86.87611053 Physarum polycephalum 5791 Evosea other_Eukaryota 224 1.03e-53   NTclustered gi|3221|emb|V01159.1| 5791 g1585 i0 86.667 7.21032504780115 210 19 40 7 316 523 5805 5603 Physarum polycephalum gene encoding 5.8S rRNA and 26S rRNA blastn 3771 224 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
11065468 11065468 PRJNA886442_P_NODE_3509_length_387_cov_2.716561_g3345_i0 PRJNA886442 3509 387 2.716561 10.51309107 Thecamoebidae sp. strain P126 746911 Discosea other_Eukaryota 582 1.0599999999999999e-161   NTclustered gi|292399457|gb|GU810185.1| 746911 g3345 i0 94.315 56.6382428940568 387 10 100 11 1 387 601 227 Thecamoebidae sp. strain P126 small subunit ribosomal RNA gene, partial sequence blastn 21919 582 1 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida   Thecamoebidae sp. strain P126
13615635 13615635 PRJNA886442_P_NODE_9651_length_260_cov_1.668449_g9487_i0 PRJNA886442 9651 260 1.668449 4.3379674 Hyperamoeba sp. 2 EJC 189322 Evosea other_Eukaryota 464 2.57e-126   NTclustered gi|33309666|gb|AF411290.1| 189322 g9487 i0 98.851 89.0115384615385 261 1 99 2 2 260 2148 1888 Hyperamoeba sp. 2 EJC 18S ribosomal RNA gene, complete sequence blastn 23143 464 1 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. 2 EJC
16164713 16164713 PRJNA886442_P_NODE_6313_length_310_cov_1.632911_g6149_i0 PRJNA886442 6313 310 1.632911 5.0620241 Fuligo septica 159720 Evosea other_Eukaryota 178 4.58e-40   NTclustered gi|37515398|emb|AJ584697.1| 159720 g6149 i0 95.495 3.22903225806452 111 5 36 0 198 308 5990 5880 Fuligo septica 18S rRNA gene, ITS1, 5.8S rRNA gene, ITS2 and 28S rRNA gene, isolate NY-1 blastn 1001 178 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Fuligo Fuligo septica
17440129 17440129 PRJNA886442_P_NODE_5514_length_326_cov_2.031621_g5350_i0 PRJNA886442 5514 326 2.031621 6.62308446 Physarum polycephalum 5791 Evosea other_Eukaryota 130 1.38e-25   NTclustered gi|326632058|gb|HQ849399.1| 5791 g5350 i0 82.877 7.95705521472393 146 24 44 1 80 224 2253 2108 Physarum polycephalum strain M3CVIII 23S large subunit ribosomal RNA, complete sequence; mitochondrial blastn 2594 130 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum polycephalum
18713287 18713287 PRJNA886442_P_NODE_1775_length_519_cov_30.854260_g1611_i0 PRJNA886442 1775 519 30.85426 160.1336094 Physarum flavicomum 35220 Evosea other_Eukaryota 250 1.68e-61   NTclustered gi|475222|emb|X78959.1| 35220 g1611 i0 94.479 34.7591522157996 163 8 46 1 357 519 236 397 P.flavicomum (UFF6) large subunit rRNA gene blastn 18040 250 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Physariida Physaraceae Physarum Physarum flavicomum
18713308 18713308 PRJNA886442_P_NODE_3115_length_405_cov_1.409639_g2951_i0 PRJNA886442 3115 405 1.409639 5.70903795 Hyperamoeba sp. 2 EJC 189322 Evosea other_Eukaryota 699 0   NTclustered gi|33309666|gb|AF411290.1| 189322 g2951 i0 97.772 79.5925925925926 404 6 99 3 4 405 15 417 Hyperamoeba sp. 2 EJC 18S ribosomal RNA gene, complete sequence blastn 32235 699 1 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. 2 EJC
19092938 19092938 PRJNA886442_P_NODE_4155_length_363_cov_1.303448_g3991_i0 PRJNA886442 4155 363 1.303448 4.73151624 Thecamoebida 242543 Discosea other_Eukaryota 610 4.529999999999999e-170   NTclustered gi|827747070|gb|KP277502.1| 343529 g3991 i0 96.765 47.7906336088154 371 3 100 6 1 363 2077 1708 Sappinia diploidea strain sd-D2 18S ribosomal RNA gene, partial sequence blastn 17348 614 0.993485342019544 Eukaryota Amoebozoa   Discosea   Longamoebia Thecamoebida Sappinia Sappinia diploidea
21263887 21263887 PRJNA886442_P_NODE_2877_length_418_cov_2.843478_g2713_i0 PRJNA886442 2877 418 2.843478 11.88573804 Hyperamoeba sp. 2 EJC 189322 Evosea other_Eukaryota 739 0   NTclustered gi|33309666|gb|AF411290.1| 189322 g2713 i0 98.571 40.8636363636364 420 3 100 3 1 418 1624 1206 Hyperamoeba sp. 2 EJC 18S ribosomal RNA gene, complete sequence blastn 17081 739 1 Eukaryota Amoebozoa   Evosea Eumycetozoa     Hyperamoeba Hyperamoeba sp. 2 EJC
23814102 23814102 PRJNA886442_P_NODE_1559_length_553_cov_14.837500_g1396_i0 PRJNA886442 1559 553 14.8375 82.051375 Stemonitis herbatica 1092567 Evosea other_Eukaryota 1005 0   NTclustered gi|1652855072|gb|MK041080.1| 1092567 g1396 i0 99.458 89.3236889692586 553 3 100 0 1 553 1402 1954 Stemonitis herbatica voucher BW1509 small subunit ribosomal RNA gene, partial sequence blastn 49396 1005 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitis Stemonitis herbatica
23814123 23814123 PRJNA886442_P_NODE_299_length_1286_cov_26.043693_g187_i0 PRJNA886442 299 1286 26.043693 334.92189198 Stemonitis herbatica 1092567 Evosea other_Eukaryota 2193 0   NTclustered gi|1652855072|gb|MK041080.1| 1092567 g187 i0 97.586 70.452566096423 1284 23 99 8 1 1278 1282 1 Stemonitis herbatica voucher BW1509 small subunit ribosomal RNA gene, partial sequence blastn 90602 2193 1 Eukaryota Amoebozoa   Evosea Eumycetozoa Stemonitida Stemonitidae Stemonitis Stemonitis herbatica
32899473 32899473 PRJNA886442_P_NODE_3520_length_387_cov_1.242038_g3356_i0 PRJNA886442 3520 387 1.242038 4.80668706 Pelomyxa schiedti 1580589 Evosea other_Eukaryota 135 5.65e-35   NR KAH3766888.1 1580589 g3356 i0 50.8 0.992248062015504 128 63 99.2 0 2 385 216 343 KAH3766888.1 glycoside hydrolase family 63 protein [Pelomyxa schiedti] diamond 384 135 1 Eukaryota Amoebozoa   Evosea   Pelobiontida Pelomyxidae Pelomyxa Pelomyxa schiedti

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;