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contig_metadata

13 rows where bioproject = "PRJNA885753" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 13 ✖

bioproject 1

  • PRJNA885753 · 13 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3793277 3793277 PRJNA885753_S_NODE_2783_length_279_cov_2.242718_g2765_i0 PRJNA885753 2783 279 2.242718 6.25718322 root 1 Root_unresolved Root_unresolved 335 2.2799999999999993e-87   NTclustered gi|1377596870|gb|MF044052.1| 10515 g2765 i0 100 92.6917562724014 181 0 92 0 18 198 33920 34100 human adenovirus 2 isolate HK91, complete genome blastn 25861 335 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
8894218 8894218 PRJNA885753_S_NODE_4227_length_246_cov_0.901734_g4209_i0 PRJNA885753 4227 246 0.901734 2.21826564 root 1 Root_unresolved Root_unresolved 455 1.4500000000000002e-123   NTclustered gi|2452971982|gb|OQ518311.1| 10533 g4209 i0 100 100.073170731707 246 0 100 0 1 246 34296 34541 Human adenovirus 1 isolate HAdV-C1/USA/2C6/2009, complete genome blastn 24618 455 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
11065286 11065286 PRJNA885753_S_NODE_3929_length_249_cov_1.255682_g3911_i0 PRJNA885753 3929 249 1.255682 3.12664818 Eriocheir sinensis kita-like virus 3022112 Viruses Viruses 448 2.46e-121   NTclustered gi|2430285606|gb|OP019101.1| 3022112 g3911 i0 99.197 1 249 1 100 1 1 249 12874 12627 MAG: Eriocheir sinensis kita-like virus isolate Suqian, Jiangsu genomic sequence blastn 249 448 1 Viruses   Orthornavirae Kitrinoviricota Alsuviricetes Martellivirales Kitaviridae   Eriocheir sinensis kita-like virus
19988366 19988366 PRJNA885753_S_NODE_3556_length_254_cov_7.430939_g3538_i0 PRJNA885753 3556 254 7.430939 18.87458506 Orthoavulavirus javaense 3051375 Viruses Viruses 62.1 3.83e-5   NTclustered gi|1810954291|gb|MN727300.2| 2560319 g3538 i0 100 0.12992125984252 33 0 13 0 1 33 15285 15253 Avian paramyxovirus 1 isolate chicken/Indonesia/ITA/012WJ, complete genome blastn 33 62.1 1 Viruses   Orthornavirae Negarnaviricota Monjiviricetes Mononegavirales Paramyxoviridae Orthoavulavirus Orthoavulavirus javaense
22918946 22918946 PRJNA885753_S_NODE_2338_length_300_cov_1.030837_g2320_i0 PRJNA885753 2338 300 1.030837 3.092511 root 1 Root_unresolved Root_unresolved 555 1.7399999999999995e-153   NTclustered gi|1377596870|gb|MF044052.1| 10515 g2320 i0 100 100 300 0 100 0 1 300 33184 32885 human adenovirus 2 isolate HK91, complete genome blastn 30000 555 1 Viruses   Bamfordvirae Preplasmiviricota Pharingeaviricetes Rowavirales Adenoviridae Mastadenovirus Mastadenovirus caesari
27340066 27340066 PRJNA885753_S_NODE_3543_length_255_cov_1.170330_g3525_i0 PRJNA885753 3543 255 1.17033 2.9843415 Synechococcus phage S-CREM1 2982919 Viruses Viruses 90.9 1.77e-20   NR UYA57495.1 2982919 g3525 i0 58.7 0.882352941176471 75 31 88.2 0 18 242 1 75 UYA57495.1 loader of DNA helicase [Synechococcus phage S-CREM1] diamond 225 90.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae   Synechococcus phage S-CREM1
27908007 27908007 PRJNA885753_S_NODE_2545_length_290_cov_1.078341_g2527_i0 PRJNA885753 2545 290 1.078341 3.1271889 uncultured Caudovirales phage 2100421 Viruses Viruses 85.9 8.45e-20   NR CAB4184887.1 2100421 g2527 i0 72.6 1.24137931034483 62 17 64.1 0 280 95 1 62 CAB4184887.1 hypothetical protein UFOVP1116_44 [uncultured Caudovirales phage] diamond 360 85.9 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28223856 28223856 PRJNA885753_S_NODE_1146_length_399_cov_1.128834_g1128_i0 PRJNA885753 1146 399 1.128834 4.50404766 uncultured Caudovirales phage 2100421 Viruses Viruses 152 2.1e-40   NR CAB4148890.1 2100421 g1128 i0 61.9 4.09774436090226 139 46 99.2 2 397 2 4 142 CAB4148890.1 COG4695 Phage-related protein [uncultured Caudovirales phage] diamond 1635 152 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28476652 28476652 PRJNA885753_S_NODE_3966_length_249_cov_0.886364_g3948_i0 PRJNA885753 3966 249 0.886364 2.20704636 uncultured Caudovirales phage 2100421 Viruses Viruses 119 1.76e-29   NR CAB4184372.1 2100421 g3948 i0 75.3 0.975903614457831 81 20 97.6 0 3 245 291 371 CAB4184372.1 COG4653 Predicted phage phi-C31 gp36 major capsid-like protein [uncultured Caudovirales phage] diamond 243 119 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
28926509 28926509 PRJNA885753_S_NODE_4608_length_242_cov_0.911243_g4590_i0 PRJNA885753 4608 242 0.911243 2.20520806 root 1 Root_unresolved Root_unresolved 95.1 4.85e-22   NR WDS61225.1 753087 g4590 i0 55.7 9.76859504132231 79 35 97.9 0 238 2 1 79 WDS61225.1 sliding clamp DNA polymerase accessory protein [Synechococcus phage S-BM3] diamond 2364 95.9 0.991657977059437 Viruses   Heunggongvirae Uroviricota Caudoviricetes Pantevenvirales Kyanoviridae   Synechococcus phage S-BM3
29518487 29518487 PRJNA885753_S_NODE_4370_length_244_cov_0.912281_g4352_i0 PRJNA885753 4370 244 0.912281 2.22596564 Tombusviridae sp. 2583950 Viruses Viruses 84 6.91e-18   NR WWV89951.1 2583950 g4352 i0 52.7 0.909836065573771 74 33 91 1 244 23 73 144 WWV89951.1 MAG: RNA polymerase, partial [Tombusviridae sp.] diamond 222 84 1 Viruses   Orthornavirae Kitrinoviricota Tolucaviricetes Tolivirales Tombusviridae   Tombusviridae sp.
30118526 30118526 PRJNA885753_S_NODE_3092_length_268_cov_1.200000_g3074_i0 PRJNA885753 3092 268 1.2 3.216 uncultured Caudovirales phage 2100421 Viruses Viruses 77 1.65e-14   NR CAB4148604.1 2100421 g3074 i0 44.2 0.962686567164179 86 48 96.3 0 258 1 145 230 CAB4148604.1 hypothetical protein UFOVP524_20 [uncultured Caudovirales phage] diamond 258 77 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes   Peduoviridae Maltschvirus Maltschvirus maltsch
32276552 32276552 PRJNA885753_S_NODE_3538_length_255_cov_1.241758_g3520_i0 PRJNA885753 3538 255 1.241758 3.1664829 root 1 Root_unresolved Root_unresolved 88.2 4.29e-18   NR BAR24318.1 1407671 g3520 i0 67.2 2.31764705882353 64 21 75.3 0 253 62 537 600 BAR24318.1 terminase large subunit [uncultured Mediterranean phage uvMED] diamond 591 88.2 1 Viruses   Heunggongvirae Uroviricota Caudoviricetes       uncultured Mediterranean phage uvMED

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;