RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA885753" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA885753 · 2 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31224347 31224347 PRJNA885753_S_NODE_4075_length_247_cov_2.241379_g4057_i0 PRJNA885753 4075 247 2.241379 5.53620613 Minisyncoccota bacterium 2053589 Bacteria Bacteria 50.4 5.84e-5   NR MDD3970255.1 2053589 g4057 i0 88.9 0.327935222672065 27 3 32.8 0 245 165 224 250 MDD3970255.1 hypothetical protein [Candidatus Paceibacterota bacterium] diamond 81 50.4 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32899465 32899465 PRJNA885753_S_NODE_1740_length_336_cov_1.186312_g1722_i0 PRJNA885753 1740 336 1.186312 3.98600832 Minisyncoccota bacterium 2053589 Bacteria Bacteria 147 9.879999999999999e-43   NR MDD3919536.1 2053589 g1722 i0 77.9 0.767857142857143 86 17 76.8 1 336 79 64 147 MDD3919536.1 DUF2227 family putative metal-binding protein [Candidatus Paceibacterota bacterium] diamond 258 147 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;