RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA884104" and tax_phylum = "Thermoproteota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoproteota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27624266 27624266 PRJNA884104_S_NODE_29124_length_377_cov_1.986842_g28381_i0 PRJNA884104 29124 377 1.986842 7.49039434 Stygiolobus caldivivus 2824673 Archaea Archaea 60.5 9.51e-9   NR WP_221289405.1 2824673 g28381 i0 34.7 0.986737400530504 124 64 93.1 4 13 363 7 120 WP_221289405.1 universal stress protein [Stygiolobus caldivivus] diamond 372 60.5 1 Archaea   Thermoproteati Thermoproteota Thermoprotei Sulfolobales Sulfolobaceae Stygiolobus Stygiolobus caldivivus
28642524 28642524 PRJNA884104_S_NODE_55867_length_280_cov_1.115942_g55124_i0 PRJNA884104 55867 280 1.115942 3.1246376 Archaea 2157 Archaea Archaea 82.4 7.27e-18   NR RLF24173.1 2250277 g55124 i0 52.9 3.68571428571429 85 39 91.1 1 26 280 10 93 RLF24173.1 MAG: peptidyl-tRNA hydrolase [Thermoprotei archaeon] diamond 1032 83.2 0.990384615384615 Archaea   Thermoproteati Thermoproteota Thermoprotei       Thermoprotei archaeon
30055297 30055297 PRJNA884104_S_NODE_83091_length_243_cov_0.905882_g82348_i0 PRJNA884104 83091 243 0.905882 2.20129326 Thermoproteota archaeon 2056631 Archaea Archaea 164 4.88e-50   NR MDP8914877.1 2056631 g82348 i0 96.2 0.975308641975309 79 3 97.5 0 241 5 29 107 MDP8914877.1 hypothetical protein [Thermoproteota archaeon] diamond 237 164 1 Archaea   Thermoproteati Thermoproteota         Thermoproteota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;