RNAquarium Metadata Server
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contig_metadata

10 rows where bioproject = "PRJNA884104", tax_phylum = "Peploviricota" and tax_superkingdom = "Viruses"

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tax_superkingdom 1

  • Viruses · 10 ✖

tax_phylum 1

  • Peploviricota · 10 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 10 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
860827 860827 PRJNA884104_S_NODE_43621_length_315_cov_1.082645_g42878_i0 PRJNA884104 43621 315 1.082645 3.41033175 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 62.1 4.9e-5   NTclustered gi|1465382783|emb|LS992247.1| 10376 g42878 i0 100 11.4253968253968 33 0 10 0 1 33 58025 58057 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 3599 62.1 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
3412361 3412361 PRJNA884104_S_NODE_83843_length_242_cov_1.224852_g83100_i0 PRJNA884104 83843 242 1.224852 2.96414184 Simplexvirus humanalpha2 3050293 Viruses Viruses 75 4.65e-9   NTclustered gi|1893169343|gb|MT364888.1| 10310 g83100 i0 92.453 17.6157024793388 53 2 22 1 190 242 81 31 Human alphaherpesvirus 2, partial genome blastn 4263 75 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Simplexvirus Simplexvirus humanalpha2
7619264 7619264 PRJNA884104_S_NODE_41306_length_322_cov_2.116466_g40563_i0 PRJNA884104 41306 322 2.116466 6.81502052 Viruses 10239 Viruses Viruses 52.8 0.03   NTclustered gi|1953437643|gb|MT157331.1| 47929 g40563 i0 100 0.453416149068323 28 0 9 0 295 322 162884 162911 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 146 52.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
8894202 8894202 PRJNA884104_S_NODE_83607_length_242_cov_1.491124_g82864_i0 PRJNA884104 83607 242 1.491124 3.60852008 Viruses 10239 Viruses Viruses 87.9 5.98e-13   NTclustered gi|1953437643|gb|MT157331.1| 47929 g82864 i0 93.333 25.7272727272727 60 2 25 1 1 60 162941 162884 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 6226 87.9 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
10169798 10169798 PRJNA884104_S_NODE_31668_length_363_cov_3.072414_g30925_i0 PRJNA884104 31668 363 3.072414 11.15286282 Viruses 10239 Viruses Viruses 69.4 3.42e-7   NTclustered gi|1465382783|emb|LS992247.1| 10376 g30925 i0 100 11.8126721763085 37 0 10 0 2 38 88199 88235 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 4288 69.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
16163028 16163028 PRJNA884104_S_NODE_18633_length_467_cov_1.164975_g17891_i0 PRJNA884104 18633 467 1.164975 5.44043325 Lymphocryptovirus humangamma4 3050299 Viruses Viruses 58.4 0.001   NTclustered gi|2609791700|gb|OR652422.1| 10376 g17891 i0 97.143 0.224839400428266 35 0 7 1 433 467 9244 9277 Human gammaherpesvirus 4 strain 725, partial genome blastn 105 58.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4
19092755 19092755 PRJNA884104_S_NODE_60835_length_268_cov_1.092308_g60092_i0 PRJNA884104 60835 268 1.092308 2.92738544 Viruses 10239 Viruses Viruses 95.3 4.02e-15   NTclustered gi|1953437643|gb|MT157331.1| 47929 g60092 i0 95.082 26.2164179104478 61 1 23 2 208 268 162888 162946 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 7026 95.3 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
19987122 19987122 PRJNA884104_S_NODE_24196_length_412_cov_1.076696_g23453_i0 PRJNA884104 24196 412 1.076696 4.43598752 Cytomegalovirus macacinebeta3 3050308 Viruses Viruses 76.8 2.35e-9   NTclustered gi|1953437643|gb|MT157331.1| 47929 g23453 i0 94.231 10.126213592233 52 0 12 3 354 404 162874 162923 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 4172 76.8 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
21263490 21263490 PRJNA884104_S_NODE_80017_length_244_cov_5.005848_g79274_i0 PRJNA884104 80017 244 5.005848 12.21426912 Cytomegalovirus macacinebeta3 3050308 Viruses Viruses 102 2.15e-17   NTclustered gi|1953437643|gb|MT157331.1| 47929 g79274 i0 92.958 30.1926229508197 71 3 29 1 1 71 162951 162883 Macacine betaherpesvirus 3 strain UCD59, complete genome blastn 7367 102 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Cytomegalovirus Cytomegalovirus macacinebeta3
22918787 22918787 PRJNA884104_S_NODE_22638_length_425_cov_1.116477_g21895_i0 PRJNA884104 22638 425 1.116477 4.74502725 Viruses 10239 Viruses Viruses 58.4 8.8e-4   NTclustered gi|1465382783|emb|LS992247.1| 10376 g21895 i0 100 8.18352941176471 31 0 7 0 395 425 88235 88205 Human gammaherpesvirus 4 isolate Human herpesvirus 4 genome assembly, chromosome: I blastn 3478 58.4 1 Viruses   Heunggongvirae Peploviricota Herviviricetes Herpesvirales Orthoherpesviridae Lymphocryptovirus Lymphocryptovirus humangamma4

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;