RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA884104", tax_phylum = "Nanobdellota" and tax_superkingdom = "Archaea"

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tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Nanobdellota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29549930 29549930 PRJNA884104_S_NODE_37550_length_336_cov_2.927757_g36807_i0 PRJNA884104 37550 336 2.927757 9.83726352 Nanoarchaeum equitans Kin4-M 228908 Archaea Archaea 62.8 1.12e-9   NR AAR39227.1 228908 g36807 i0 47.6 0.5625 63 33 56.3 0 316 128 5 67 AAR39227.1 NEQ379 [Nanoarchaeum equitans Kin4-M] diamond 189 62.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia Nanoarchaeales Nanoarchaeaceae Nanoarchaeum Nanoarchaeum equitans
30782133 30782133 PRJNA884104_S_NODE_84614_length_242_cov_0.911243_g83871_i0 PRJNA884104 84614 242 0.911243 2.20520806 Candidatus Nanoarchaeia archaeon 2910166 Archaea Archaea 57.8 1.69e-7   NR HLD71959.1 2910166 g83871 i0 45 0.991735537190083 80 41 97.9 2 5 241 254 331 HLD71959.1 FAD-dependent oxidoreductase [Candidatus Nanoarchaeia archaeon] diamond 240 57.8 1 Archaea   Nanobdellati Nanobdellota Candidatus Nanoarchaeia       Candidatus Nanoarchaeia archaeon
32205190 32205190 PRJNA884104_S_NODE_81838_length_243_cov_1.811765_g81095_i0 PRJNA884104 81838 243 1.811765 4.40258895 Nanobdellota archaeon 2026764 Archaea Archaea 109 1.03e-25   NR MCA9485224.1 2026764 g81095 i0 67.5 0.950617283950617 77 25 95.1 0 231 1 285 361 MCA9485224.1 GTP-binding protein [Nanoarchaeota archaeon] diamond 231 109 1 Archaea   Nanobdellati Nanobdellota         Nanobdellota archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;