RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA884104", tax_phylum = "Cossaviricota" and tax_superkingdom = "Viruses"

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analysis 2

tax_superkingdom 1

  • Viruses · 2 ✖

tax_phylum 1

  • Cossaviricota · 2 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 2 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
21263443 21263443 PRJNA884104_S_NODE_77377_length_246_cov_0.890173_g76634_i0 PRJNA884104 77377 246 0.890173 2.18982558 Upsilonpapillomavirus 1 1176150 Viruses Viruses 52.8 0.022   NTclustered gi|374922910|gb|JN709469.1| 1144380 g76634 i0 100 0.113821138211382 28 0 11 0 9 36 878 905 Tursiops truncatus papillomavirus 4 strain Tt08-09-4, complete genome blastn 28 52.8 1 Viruses   Shotokuvirae Cossaviricota Papovaviricetes Zurhausenvirales Papillomaviridae Upsilonpapillomavirus Upsilonpapillomavirus 1
27466409 27466409 PRJNA884104_S_NODE_69163_length_251_cov_0.865169_g68420_i0 PRJNA884104 69163 251 0.865169 2.17157419 Parvovirus panthera4442 3117168 Viruses Viruses 99.8 2.72e-22   NR DBA46932.1 3117168 g68420 i0 61.4 0.99203187250996006 83 31 99.2 1 250 2 382 463 DBA46932.1 MAG TPA_asm: VP [Parvovirus panthera4442] diamond 249 99.8 1 Viruses   Shotokuvirae Cossaviricota Quintoviricetes Piccovirales Parvoviridae   Parvovirus panthera4442

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;