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contig_metadata

13 rows where bioproject = "PRJNA884104" and tax_phylum = "Chlamydiota"

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tax_superkingdom 1

tax_phylum 1

  • Chlamydiota · 13 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA884104 · 13 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
860884 860884 PRJNA884104_S_NODE_46161_length_307_cov_1.316239_g45418_i0 PRJNA884104 46161 307 1.316239 4.04085373 Bacteria 2 Bacteria Bacteria 120 1.3199999999999999e-31   NR MCB1114783.1 2052156 g45418 i0 54.9 6.8599348534202 102 42 99.7 2 2 307 92 189 MCB1114783.1 superoxide dismutase [Chlamydiia bacterium] diamond 2106 120 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
7239404 7239404 PRJNA884104_S_NODE_666_length_2189_cov_7.748110_g527_i1 PRJNA884104 666 2189 7.74811 169.6061279 root 1 Root_unresolved Root_unresolved 793 8.870000000000001e-281   NR WP_059059927.1 389348 g527 i1 63 8.31749657377798 598 211 82 5 296 2089 3 590 WP_059059927.1 phosphoenolpyruvate carboxykinase (GTP) [Candidatus Protochlamydia naegleriophila] diamond 18207 793 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae Candidatus Protochlamydia Candidatus Protochlamydia naegleriophila
9788375 9788375 PRJNA884104_S_NODE_25208_length_404_cov_1.169184_g24465_i0 PRJNA884104 25208 404 1.169184 4.72350336 Chlamydiia bacterium 2052156 Bacteria Bacteria 60.5 1.85e-8   NR MCB1109477.1 2052156 g24465 i0 49.3 1.2029702970297 69 31 48.3 2 347 153 69 137 MCB1109477.1 DoxX family membrane protein [Chlamydiia bacterium] diamond 486 60.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
17439375 17439375 PRJNA884104_S_NODE_634_length_2226_cov_8.100790_g527_i0 PRJNA884104 634 2226 8.10079 180.3235854 root 1 Root_unresolved Root_unresolved 784 8.680000000000001e-277   NR WP_013182645.1 71667 g527 i0 62.8 13.0700808625337 600 213 80.7 6 1931 135 13 603 WP_013182645.1 phosphoenolpyruvate carboxykinase (GTP) [Waddlia chondrophila] diamond 29094 788 0.99492385786802 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Waddliaceae Waddlia Waddlia chondrophila
26897387 26897387 PRJNA884104_S_NODE_81221_length_244_cov_0.900585_g80478_i0 PRJNA884104 81221 244 0.900585 2.1974274 Parachlamydiales bacterium 2052178 Bacteria Bacteria 54.7 2.11e-6   NR MBX7066126.1 2052178 g80478 i0 38 0.971311475409836 79 42 97.1 2 239 3 134 205 MBX7066126.1 NAD(P)-binding domain-containing protein [Parachlamydiales bacterium] diamond 237 54.7 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales     Parachlamydiales bacterium
27308487 27308487 PRJNA884104_S_NODE_42943_length_317_cov_1.262295_g42200_i0 PRJNA884104 42943 317 1.262295 4.00147515 Chlamydiia bacterium 2052156 Bacteria Bacteria 94 6.33e-20   NR MCB1113299.1 2052156 g42200 i0 56.3 1.35331230283912 71 28 67.2 1 312 100 373 440 MCB1113299.1 deoxyribodipyrimidine photo-lyase [Chlamydiia bacterium] diamond 429 94 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
28200120 28200120 PRJNA884104_S_NODE_20126_length_449_cov_2.590426_g19383_i0 PRJNA884104 20126 449 2.590426 11.63101274 Bacteria 2 Bacteria Bacteria 117 6.02e-29   NR OGN61875.1 1797601 g19383 i0 41.9 1.92427616926503 136 75 90.9 2 412 5 121 252 OGN61875.1 MAG: hypothetical protein A3F40_03365 [Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8] diamond 864 117 1 Bacteria PVC group Pseudomonadati Chlamydiota         Chlamydiae bacterium RIFCSPHIGHO2_12_FULL_27_8
29455016 29455016 PRJNA884104_S_NODE_55150_length_282_cov_1.023923_g54407_i0 PRJNA884104 55150 282 1.023923 2.88746286 Chlamydiales bacterium 2047757 Bacteria Bacteria 103 1.92e-26   NR HSX13502.1 2047757 g54407 i0 63 0.776595744680851 73 25 77.7 1 282 64 16 86 HSX13502.1 2OG-Fe(II) oxygenase [Chlamydiales bacterium] diamond 219 103 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29612913 29612913 PRJNA884104_S_NODE_39130_length_330_cov_1.603113_g38387_i0 PRJNA884104 39130 330 1.603113 5.2902729 Chlamydiales bacterium 2047757 Bacteria Bacteria 100 1.85e-24   NR MCP5470420.1 2047757 g38387 i0 46.8 1.98181818181818 109 58 99.1 0 328 2 4 112 MCP5470420.1 ribosomal protein L24e family protein [Chlamydiales bacterium] diamond 654 100 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium
29802669 29802669 PRJNA884104_S_NODE_78991_length_245_cov_0.895349_g78248_i0 PRJNA884104 78991 245 0.895349 2.19360505 Parachlamydiaceae bacterium 2052176 Bacteria Bacteria 56.6 1.93e-7   NR MEI8365440.1 2052176 g78248 i0 57.1 1.07755102040816 42 18 51.4 0 243 118 150 191 MEI8365440.1 HD domain-containing protein [Parachlamydiaceae bacterium] diamond 264 56.6 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Parachlamydiaceae   Parachlamydiaceae bacterium
30876888 30876888 PRJNA884104_S_NODE_44854_length_311_cov_1.268908_g44111_i0 PRJNA884104 44854 311 1.268908 3.94630388 Chlamydiia bacterium 2052156 Bacteria Bacteria 44.3 0.0226   NR MCB1108406.1 2052156 g44111 i0 35.5 2.86495176848875 76 48 72.3 1 235 11 42 117 MCB1108406.1 hypothetical protein [Chlamydiia bacterium] diamond 891 44.3 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia       Chlamydiia bacterium
31160902 31160902 PRJNA884104_S_NODE_45555_length_309_cov_0.978814_g44812_i0 PRJNA884104 45555 309 0.978814 3.02453526 Rhabdochlamydiaceae bacterium 2047756 Bacteria Bacteria 43.5 0.0426   NR HEY2811008.1 2047756 g44812 i0 51.2 0.398058252427184 41 20 39.8 0 174 296 6 46 HEY2811008.1 hypothetical protein [Rhabdochlamydiaceae bacterium] diamond 123 43.5 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Parachlamydiales Candidatus Rhabdochlamydiaceae   Rhabdochlamydiaceae bacterium
31287577 31287577 PRJNA884104_S_NODE_16535_length_494_cov_4.923990_g15797_i0 PRJNA884104 16535 494 4.92399 24.3245106 Chlamydiales bacterium 2047757 Bacteria Bacteria 147 4.959999999999998e-42   NR MCP5470421.1 2047757 g15797 i0 51.9 3.63765182186235 156 69 93.5 2 483 22 6 157 MCP5470421.1 hypothetical protein [Chlamydiales bacterium] diamond 1797 147 1 Bacteria PVC group Pseudomonadati Chlamydiota Chlamydiia Chlamydiales     Chlamydiales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;