RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

9 rows where bioproject = "PRJNA884104" and tax_phylum = "Candidatus Binatota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Binatota · 9 ✖

tax_clade 1

bioproject 1

  • PRJNA884104 · 9 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9789448 9789448 PRJNA884104_S_NODE_79768_length_245_cov_0.895349_g79025_i0 PRJNA884104 79768 245 0.895349 2.19360505 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 62.4 1.74e-9   NR HEX4210647.1 2785449 g79025 i0 58 0.612244897959184 50 21 61.2 0 245 96 63 112 HEX4210647.1 DsbA family protein [Candidatus Binataceae bacterium] diamond 150 62.4 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium
11064642 11064642 PRJNA884104_S_NODE_5829_length_839_cov_2.454308_g5238_i0 PRJNA884104 5829 839 2.454308 20.59164412 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 120 1.15e-26   NR HEY2773232.1 2838779 g5238 i0 33.5 0.961859356376639 269 164 91.5 8 10 777 227 493 HEY2773232.1 hypothetical protein [Candidatus Binatia bacterium] diamond 807 120 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
22918809 22918809 PRJNA884104_S_NODE_32718_length_358_cov_1.621053_g31975_i0 PRJNA884104 32718 358 1.621053 5.80336974 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 183 1.25e-51   NR MFB3060024.1 2838779 g31975 i0 73.7 1.97765363128492 118 31 98.9 0 354 1 189 306 MFB3060024.1 M1 family metallopeptidase [Candidatus Binatia bacterium] diamond 708 183 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
26834031 26834031 PRJNA884104_S_NODE_7521_length_738_cov_2.306767_g6856_i0 PRJNA884104 7521 738 2.306767 17.02394046 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 174 1.23e-45   NR HWX21912.1 2838779 g6856 i0 43.3 1.03252032520325 254 130 97.6 5 736 17 446 699 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 762 174 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
27624286 27624286 PRJNA884104_S_NODE_53544_length_286_cov_1.145540_g52801_i0 PRJNA884104 53544 286 1.14554 3.2762444 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 80.9 5.82e-16   NR HVM85852.1 2838779 g52801 i0 58.6 2.43356643356643 58 24 60.8 0 3 176 210 267 HVM85852.1 class III extradiol ring-cleavage dioxygenase [Candidatus Binatia bacterium] diamond 696 80.9 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28539965 28539965 PRJNA884104_S_NODE_12247_length_576_cov_1.512922_g11520_i0 PRJNA884104 12247 576 1.512922 8.71443072 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 78.6 4.36e-13   NR HWX21912.1 2838779 g11520 i0 34.2 3.96875 196 95 97.4 9 13 573 523 693 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 2286 78.6 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
28539984 28539984 PRJNA884104_S_NODE_49747_length_296_cov_2.340807_g49004_i0 PRJNA884104 49747 296 2.340807 6.92878872 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 82 1.13e-15   NR HWX21912.1 2838779 g49004 i0 47.5 4.00337837837838 101 45 95.3 4 296 15 530 629 HWX21912.1 HYR domain-containing protein [Candidatus Binatia bacterium] diamond 1185 82 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
29045096 29045096 PRJNA884104_S_NODE_7208_length_755_cov_1.329912_g6554_i0 PRJNA884104 7208 755 1.329912 10.0408356 Candidatus Binatia bacterium 2838779 Bacteria Bacteria 151 1.0599999999999998e-37   NR HEY2773809.1 2838779 g6554 i0 34.6 1.03311258278146 260 150 96.6 7 743 15 289 545 HEY2773809.1 hypothetical protein [Candidatus Binatia bacterium] diamond 780 151 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia       Candidatus Binatia bacterium
30466515 30466515 PRJNA884104_S_NODE_75913_length_247_cov_0.885057_g75170_i0 PRJNA884104 75913 247 0.885057 2.18609079 Candidatus Binataceae bacterium 2785449 Bacteria Bacteria 42.7 0.0207   NR HEY2664290.1 2785449 g75170 i0 60 2.10121457489879 25 10 30.4 0 207 133 3 27 HEY2664290.1 hypothetical protein [Candidatus Binataceae bacterium] diamond 519 42.7 1 Bacteria Bacteria candidate phyla   Candidatus Binatota Candidatus Binatia Candidatus Binatales Candidatus Binataceae   Candidatus Binataceae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;