RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

3 rows where bioproject = "PRJNA884104", tax_phylum = "Candidatus Bathyarchaeota" and tax_superkingdom = "Archaea"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

  • Archaea · 3 ✖

tax_phylum 1

  • Candidatus Bathyarchaeota · 3 ✖

tax_kingdom 1

bioproject 1

  • PRJNA884104 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
29021618 29021618 PRJNA884104_S_NODE_12628_length_567_cov_3.319838_g11897_i0 PRJNA884104 12628 567 3.319838 18.82348146 root 1 Root_unresolved Root_unresolved 58.2 3.75e-6   NR MCX6655225.1 2026714 g11897 i0 37.1 1.4021164021164 97 52 50.3 5 504 220 574 663 MCX6655225.1 carboxypeptidase regulatory-like domain-containing protein [Candidatus Bathyarchaeota archaeon] diamond 795 58.2 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29179295 29179295 PRJNA884104_S_NODE_48109_length_301_cov_1.482456_g47366_i0 PRJNA884104 48109 301 1.482456 4.46219256 Archaea 2157 Archaea Archaea 103 1.94e-23   NR MBT3283979.1 2026714 g47366 i0 51 2.99003322259136 100 49 99.7 0 301 2 149 248 MBT3283979.1 hydroxylamine reductase [Candidatus Bathyarchaeota archaeon] diamond 900 103 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon
29929251 29929251 PRJNA884104_S_NODE_64851_length_259_cov_0.758065_g64108_i0 PRJNA884104 64851 259 0.758065 1.96338835 Candidatus Bathyarchaeota archaeon 2026714 Archaea Archaea 62.4 5.16e-9   NR MCW3996296.1 2026714 g64108 i0 40.7 2.75675675675676 81 45 90.3 1 25 258 164 244 MCW3996296.1 hypothetical protein [Candidatus Bathyarchaeota archaeon] diamond 714 62.4 1 Archaea   Thermoproteati Candidatus Bathyarchaeota         Candidatus Bathyarchaeota archaeon

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;