contig_metadata
10 rows where bioproject = "PRJNA884104", tax_kingdom = "Bacillati" and tax_phylum = "Mycoplasmatota"
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| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 5964440 | 5964440 | PRJNA884104_S_NODE_61225_length_267_cov_1.190722_g60482_i0 | PRJNA884104 | 61225 | 267 | 1.190722 | 3.17922774 | Bacteria | 2 | Bacteria | Bacteria | 138 | 1.09e-36 | NR | MCD4826324.1 | 1898209 | g60482 | i0 | 79.8 | 6.68539325842697 | 84 | 17 | 94.4 | 0 | 264 | 13 | 108 | 191 | MCD4826324.1 xylose isomerase [Acholeplasmataceae bacterium] | diamond | 1785 | 138 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Acholeplasmataceae bacterium | |||
| 6345298 | 6345298 | PRJNA884104_S_NODE_68425_length_251_cov_1.000000_g67682_i0 | PRJNA884104 | 68425 | 251 | 1 | 2.51 | Mesomycoplasma | 2923352 | Bacteria | Bacteria | 283 | 7.409999999999999e-72 | NTclustered | gi|1958638472|gb|MW498281.1| | 2100 | g67682 | i0 | 99.359 | 62.2111553784861 | 156 | 1 | 62 | 0 | 96 | 251 | 2244 | 2399 | Mesomycoplasma hyorhinis strain MycSu21 23S ribosomal RNA gene, partial sequence | blastn | 15615 | 283 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mesomycoplasma | Mesomycoplasma hyorhinis | |||
| 11064126 | 11064126 | PRJNA884104_S_NODE_31909_length_362_cov_1.688581_g31166_i0 | PRJNA884104 | 31909 | 362 | 1.688581 | 6.11266322 | Mycoplasmopsis bovigenitalium | 2112 | Bacteria | Bacteria | 52.8 | 0.034 | NTclustered | gi|1109662972|dbj|AP017902.1| | 2112 | g31166 | i0 | 100 | 0.154696132596685 | 28 | 0 | 8 | 0 | 100 | 127 | 670740 | 670767 | Mycoplasma bovigenitalium DNA, complete genome | blastn | 56 | 52.8 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mycoplasmoidales | Metamycoplasmataceae | Mycoplasmopsis | Mycoplasmopsis bovigenitalium | |||
| 21263527 | 21263527 | PRJNA884104_S_NODE_82057_length_243_cov_1.341176_g81314_i0 | PRJNA884104 | 82057 | 243 | 1.341176 | 3.25905768 | Mariniplasma anaerobium | 2735436 | Bacteria | Bacteria | 67.6 | 7.82e-7 | NTclustered | gi|1964073164|dbj|AP024412.1| | 2735436 | g81314 | i0 | 85.714 | 0.489711934156379 | 63 | 9 | 26 | 0 | 8 | 70 | 312507 | 312445 | Mariniplasma anaerobium DNA, complete genome | blastn | 119 | 67.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmataceae | Mariniplasma | Mariniplasma anaerobium | ||
| 26928904 | 26928904 | PRJNA884104_S_NODE_75882_length_247_cov_0.885057_g75139_i0 | PRJNA884104 | 75882 | 247 | 0.885057 | 2.18609079 | Acholeplasmatales bacterium | 2053494 | Bacteria | Bacteria | 62.4 | 4.38e-9 | NR | MCR5112743.1 | 2053494 | g75139 | i0 | 41.9 | 0.753036437246964 | 62 | 36 | 75.3 | 0 | 245 | 60 | 329 | 390 | MCR5112743.1 hypothetical protein [Acholeplasmatales bacterium] | diamond | 186 | 62.4 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmatales bacterium | ||||
| 28697804 | 28697804 | PRJNA884104_S_NODE_59987_length_270_cov_1.147208_g59244_i0 | PRJNA884104 | 59987 | 270 | 1.147208 | 3.0974616 | Mycoplasma buteonis | 171280 | Bacteria | Bacteria | 43.1 | 0.0399 | NR | WP_036453040.1 | 171280 | g59244 | i0 | 31.3 | 0.922222222222222 | 83 | 53 | 88.9 | 2 | 270 | 31 | 1086 | 1167 | WP_036453040.1 FtsX-like permease family protein, partial [Mycoplasma buteonis] | diamond | 249 | 43.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mycoplasmatales | Mycoplasmataceae | Mycoplasma | Mycoplasma buteonis | ||
| 30055293 | 30055293 | PRJNA884104_S_NODE_72411_length_249_cov_0.875000_g71668_i0 | PRJNA884104 | 72411 | 249 | 0.875 | 2.17875 | Spiroplasma chrysopicola | 216933 | Bacteria | Bacteria | 78.6 | 9.7e-15 | NR | WP_016339049.1 | 216933 | g71668 | i0 | 51.9 | 5.80722891566265 | 81 | 33 | 97.6 | 1 | 247 | 5 | 610 | 684 | WP_016339049.1 isoleucine--tRNA ligase [Spiroplasma chrysopicola] | diamond | 1446 | 78.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma chrysopicola | ||
| 30497853 | 30497853 | PRJNA884104_S_NODE_78953_length_245_cov_0.895349_g78210_i0 | PRJNA884104 | 78953 | 245 | 0.895349 | 2.19360505 | Acholeplasmatales bacterium | 2053494 | Bacteria | Bacteria | 60.1 | 2.9e-8 | NR | MBR4495755.1 | 2053494 | g78210 | i0 | 54.8 | 1.3469387755102 | 62 | 27 | 74.7 | 1 | 56 | 238 | 12 | 73 | MBR4495755.1 hypothetical protein [Acholeplasmatales bacterium] | diamond | 330 | 60.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Acholeplasmatales | Acholeplasmatales bacterium | ||||
| 31287600 | 31287600 | PRJNA884104_S_NODE_51995_length_290_cov_1.419355_g51252_i0 | PRJNA884104 | 51995 | 290 | 1.419355 | 4.1161295 | Spiroplasma ixodetis | 2141 | Bacteria | Bacteria | 76.6 | 1.2e-15 | NR | WP_281748395.1 | 2141 | g51252 | i0 | 37.3 | 1.81034482758621 | 83 | 50 | 85.9 | 1 | 290 | 42 | 8 | 88 | WP_281748395.1 thioredoxin [Spiroplasma ixodetis] | diamond | 525 | 76.6 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Entomoplasmatales | Spiroplasmataceae | Spiroplasma | Spiroplasma ixodetis | ||
| 32300419 | 32300419 | PRJNA884104_S_NODE_61679_length_266_cov_1.160622_g60936_i0 | PRJNA884104 | 61679 | 266 | 1.160622 | 3.08725452 | Mollicutes bacterium PWAP | 2885760 | Bacteria | Bacteria | 53.1 | 4.27e-6 | NR | MBX4209690.1 | 2885760 | g60936 | i0 | 72.7 | 2.23308270676692 | 33 | 9 | 37.2 | 0 | 142 | 44 | 2 | 34 | MBX4209690.1 adenylate kinase [Mollicutes bacterium PWAP] | diamond | 594 | 53.1 | 1 | Bacteria | Bacillati | Mycoplasmatota | Mollicutes | Mollicutes bacterium PWAP |
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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;