RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA884104", tax_clade = "Metamonada" and tax_phylum = "Parabasalia"

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tax_superkingdom 1

tax_phylum 1

  • Parabasalia · 7 ✖

tax_clade 1

  • Metamonada · 7 ✖

bioproject 1

  • PRJNA884104 · 7 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27181674 27181674 PRJNA884104_S_NODE_62442_length_264_cov_1.209424_g61699_i0 PRJNA884104 62442 264 1.209424 3.19287936 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 61.2 3.62e-9   NR XP_067774098.1 135588 g61699 i0 43.4 2.61363636363636 76 32 86.4 1 237 10 101 165 XP_067774098.1 Tetratricopeptide repeat protein 1 [Histomonas meleagridis] diamond 690 61.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
27782143 27782143 PRJNA884104_S_NODE_79404_length_245_cov_0.895349_g78661_i0 PRJNA884104 79404 245 0.895349 2.19360505 Tritrichomonas foetus 1144522 Parabasalia other_Eukaryota 71.2 5.72e-13   NR XP_068365242.1 1144522 g78661 i0 50.7 0.844897959183673 69 33 83.3 1 240 37 95 163 XP_068365242.1 Ras-related protein ORAB-1 [Tritrichomonas foetus] diamond 207 71.2 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Tritrichomonadidae Tritrichomonas Tritrichomonas foetus
27813806 27813806 PRJNA884104_S_NODE_54404_length_284_cov_0.981043_g53661_i0 PRJNA884104 54404 284 0.981043 2.78616212 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 45.1 0.00827   NR XP_067777439.1 135588 g53661 i0 32.5 1.91197183098592 80 51 83.5 2 3 239 24 101 XP_067777439.1 FAS-associated factor 2-B [Histomonas meleagridis] diamond 543 45.1 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
29423614 29423614 PRJNA884104_S_NODE_59329_length_271_cov_1.939394_g58586_i0 PRJNA884104 59329 271 1.939394 5.25575774 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 78.6 7.63e-15   NR XP_067778939.1 135588 g58586 i0 57.8 1.38376383763838 64 27 70.8 0 63 254 279 342 XP_067778939.1 adenosine kinase 2 [Histomonas meleagridis] diamond 375 78.6 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30497812 30497812 PRJNA884104_S_NODE_25333_length_403_cov_1.166667_g24590_i0 PRJNA884104 25333 403 1.166667 4.70166801 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 113 3.5e-26   NR XP_067774949.1 135588 g24590 i0 48.2 1.89826302729529 137 64 99.8 3 1 402 399 531 XP_067774949.1 Copine family protein [Histomonas meleagridis] diamond 765 113 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis
30505727 30505727 PRJNA884104_S_NODE_48233_length_301_cov_1.140351_g47490_i0 PRJNA884104 48233 301 1.140351 3.43245651 Trichomonadida 37104 Parabasalia other_Eukaryota 135 3.68e-36   NR AAQ19195.1 5730 g47490 i0 64.6 7.87375415282392 99 34 97.7 1 294 1 126 224 AAQ19195.1 enolase, partial [Tetratrichomonas gallinarum] diamond 2370 135 1 Eukaryota Metamonada   Parabasalia   Trichomonadida Trichomonadidae Tetratrichomonas Tetratrichomonas gallinarum
31129300 31129300 PRJNA884104_S_NODE_29615_length_374_cov_2.691030_g28872_i0 PRJNA884104 29615 374 2.69103 10.0644522 Histomonas meleagridis 135588 Parabasalia other_Eukaryota 100 1.98e-24   NR XP_067769820.1 135588 g28872 i0 57.1 0.786096256684492 98 41 78.6 1 336 43 15 111 XP_067769820.1 uncharacterized protein GO595_009871 [Histomonas meleagridis] diamond 294 100 1 Eukaryota Metamonada   Parabasalia   Tritrichomonadida Dientamoebidae Histomonas Histomonas meleagridis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;