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contig_metadata

7 rows where bioproject = "PRJNA884104", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 7 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 7 ✖

bioproject 1

  • PRJNA884104 · 7 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27719303 27719303 PRJNA884104_S_NODE_87604_length_230_cov_2.458599_g86861_i0 PRJNA884104 87604 230 2.458599 5.6547777 Fidelibacterota bacterium 2026760 Bacteria Bacteria 76.3 3.97e-14   NR MEE2858183.1 2026760 g86861 i0 46.6 1.94347826086957 73 33 93.9 3 2 217 16 83 MEE2858183.1 dockerin type I domain-containing protein [Fidelibacterota bacterium] diamond 447 76.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
28168782 28168782 PRJNA884104_S_NODE_25185_length_404_cov_1.483384_g24442_i0 PRJNA884104 25185 404 1.483384 5.99287136 Pseudomonadati 3379134 Bacteria Bacteria 109 3.44e-25   NR MCK9243802.1 2026760 g24442 i0 47 3.80940594059406 132 58 98 2 9 404 5 124 MCK9243802.1 MFS transporter [Fidelibacterota bacterium] diamond 1539 109 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29486727 29486727 PRJNA884104_S_NODE_32510_length_359_cov_1.615385_g31767_i0 PRJNA884104 32510 359 1.615385 5.79923215 Fidelibacterota bacterium 2026760 Bacteria Bacteria 53.5 1.62e-5   NR MDP7609878.1 2026760 g31767 i0 30.3 2.79944289693593 119 81 99.4 2 1 357 26 142 MDP7609878.1 hypothetical protein [Fidelibacterota bacterium] diamond 1005 53.5 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29652397 29652397 PRJNA884104_S_NODE_47430_length_303_cov_1.673913_g46687_i0 PRJNA884104 47430 303 1.673913 5.07195639 Bacteria 2 Bacteria Bacteria 86.3 3.73e-17   NR MAX30592.1 2026760 g46687 i0 48.5 2.4950495049505 99 48 98 2 2 298 448 543 MAX30592.1 adenylyltransferase [Fidelibacterota bacterium] diamond 756 87 0.991954022988506 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
29676098 29676098 PRJNA884104_S_NODE_63050_length_263_cov_0.852632_g62307_i0 PRJNA884104 63050 263 0.852632 2.24242216 Fidelibacterota bacterium 2026760 Bacteria Bacteria 115 3.22e-28   NR MFL2988968.1 2026760 g62307 i0 69.1 13.5399239543726 81 22 92.4 1 243 1 200 277 MFL2988968.1 pyridoxal phosphate-dependent aminotransferase [Fidelibacterota bacterium] diamond 3561 115 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
31351092 31351092 PRJNA884104_S_NODE_40836_length_324_cov_1.426295_g40093_i0 PRJNA884104 40836 324 1.426295 4.6211958 Fidelibacterota bacterium 2026760 Bacteria Bacteria 158 4.02e-43   NR MEA3287438.1 2026760 g40093 i0 64.5 2.97222222222222 107 38 99.1 0 322 2 378 484 MEA3287438.1 NAD-dependent malic enzyme [Fidelibacterota bacterium] diamond 963 158 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
32836546 32836546 PRJNA884104_S_NODE_74700_length_248_cov_0.880000_g73957_i0 PRJNA884104 74700 248 0.88 2.1824 Fidelibacterota bacterium 2026760 Bacteria Bacteria 71.2 3.56e-12   NR MBT3217428.1 2026760 g73957 i0 47.1 0.846774193548387 70 37 84.7 0 224 15 110 179 MBT3217428.1 DUF885 domain-containing protein [Fidelibacterota bacterium] diamond 210 71.2 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;