RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

4 rows where bioproject = "PRJNA884104", tax_clade = "FCB group" and tax_phylum = "Candidatus Hydrogenedentota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Hydrogenedentota · 4 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 4 ✖

bioproject 1

  • PRJNA884104 · 4 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27568783 27568783 PRJNA884104_S_NODE_72024_length_249_cov_0.875000_g71281_i0 PRJNA884104 72024 249 0.875 2.17875 root 1 Root_unresolved Root_unresolved 61.6 9.39e-9   NR MBW7866375.1 2030809 g71281 i0 57.4 5.25301204819277 47 20 56.6 0 10 150 243 289 MBW7866375.1 DUF5011 domain-containing protein [Candidatus Hydrogenedentota bacterium] diamond 1308 61.6 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
30371779 30371779 PRJNA884104_S_NODE_27032_length_391_cov_1.242138_g26289_i0 PRJNA884104 27032 391 1.242138 4.85675958 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 57.8 1.11e-6   NR HOZ45816.1 2030809 g26289 i0 36.9 0.997442455242967 130 71 95.9 5 5 379 564 687 HOZ45816.1 Ser-Thr-rich GPI-anchored membrane family protein [Candidatus Hydrogenedentota bacterium] diamond 390 57.8 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32141919 32141919 PRJNA884104_S_NODE_85438_length_241_cov_1.375000_g84695_i0 PRJNA884104 85438 241 1.375 3.31375 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 75.1 1.37e-13   NR MCC6794793.1 2030809 g84695 i0 50 5.50207468879668 74 33 92.1 2 3 224 312 381 MCC6794793.1 PhoPQ-activated pathogenicity-related family protein [Candidatus Hydrogenedentota bacterium] diamond 1326 75.1 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium
32868037 32868037 PRJNA884104_S_NODE_13980_length_538_cov_1.335484_g13246_i0 PRJNA884104 13980 538 1.335484 7.18490392 Candidatus Hydrogenedentota bacterium 2030809 Bacteria Bacteria 77.4 6.66e-13   NR MBX7255836.1 2030809 g13246 i0 33.1 1.75650557620818 163 92 89.2 5 513 34 56 204 MBX7255836.1 hypothetical protein [Candidatus Hydrogenedentota bacterium] diamond 945 77.4 1 Bacteria FCB group Pseudomonadati Candidatus Hydrogenedentota         Candidatus Hydrogenedentota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;