RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

6 rows where bioproject = "PRJNA884104", tax_clade = "FCB group" and tax_phylum = "Candidatus Cloacimonadota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Candidatus Cloacimonadota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA884104 · 6 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27149807 27149807 PRJNA884104_S_NODE_54942_length_282_cov_1.473684_g54199_i0 PRJNA884104 54942 282 1.473684 4.15578888 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 44.7 0.0121   NR MFC1898309.1 2030808 g54199 i0 39.3 0.595744680851064 56 34 59.6 0 196 29 380 435 MFC1898309.1 Na/Pi cotransporter family protein [Candidatus Cloacimonadota bacterium] diamond 168 44.7 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
27497881 27497881 PRJNA884104_S_NODE_27503_length_388_cov_0.977778_g26760_i0 PRJNA884104 27503 388 0.977778 3.79377864 Candidatus Cloacimonadales bacterium 3060593 Bacteria Bacteria 65.9 1.54e-9   NR MFO7895620.1 3060593 g26760 i0 40 0.811855670103093 105 59 80.4 4 358 47 193 294 MFO7895620.1 FlgD immunoglobulin-like domain containing protein [Candidatus Cloacimonadales bacterium] diamond 315 65.9 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota Candidatus Cloacimonadia Candidatus Cloacimonadales     Candidatus Cloacimonadales bacterium
30474225 30474225 PRJNA884104_S_NODE_38013_length_335_cov_0.881679_g37270_i0 PRJNA884104 38013 335 0.881679 2.95362465 FCB group 1783270 Bacteria Bacteria 176 8.62e-54   NR PKN80893.1 2013733 g37270 i0 79.3 25.844776119403 111 23 99.4 0 333 1 40 150 PKN80893.1 MAG: NAD(P)H:quinone oxidoreductase, partial [Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1] diamond 8658 177 0.994350282485876 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonetes bacterium HGW-Cloacimonetes-1
30940233 30940233 PRJNA884104_S_NODE_33394_length_355_cov_1.000000_g32651_i0 PRJNA884104 33394 355 1 3.55 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 45.8 0.0105   NR MCK5051353.1 2030808 g32651 i0 33.7 1.47042253521127 92 58 77.7 2 67 342 3 91 MCK5051353.1 T9SS type A sorting domain-containing protein [Candidatus Cloacimonadota bacterium] diamond 522 45.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
31793588 31793588 PRJNA884104_S_NODE_37457_length_337_cov_1.155303_g36714_i0 PRJNA884104 37457 337 1.155303 3.89337111 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 63.2 6.55e-9   NR MDD3052503.1 2030808 g36714 i0 50.8 0.560830860534125 63 30 56.1 1 266 78 208 269 MDD3052503.1 RNA ligase family protein [Candidatus Cloacimonadota bacterium] diamond 189 63.2 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium
32395117 32395117 PRJNA884104_S_NODE_85419_length_241_cov_1.375000_g84676_i0 PRJNA884104 85419 241 1.375 3.31375 Candidatus Cloacimonadota bacterium 2030808 Bacteria Bacteria 50.8 4.9e-5   NR HPV14487.1 2030808 g84676 i0 56.1 0.983402489626556 41 18 51 0 222 100 38 78 HPV14487.1 SEL1-like repeat protein [Candidatus Cloacimonadota bacterium] diamond 237 50.8 1 Bacteria FCB group Pseudomonadati Candidatus Cloacimonadota         Candidatus Cloacimonadota bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;