RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA884104", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Minisyncoccota"

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tax_superkingdom 1

tax_phylum 1

  • Minisyncoccota · 4 ✖

tax_clade 1

  • Bacteria candidate phyla · 4 ✖

bioproject 1

  • PRJNA884104 · 4 ✖

analysis 1

tax_kingdom 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
11063935 11063935 PRJNA884104_S_NODE_22189_length_429_cov_1.300562_g21446_i0 PRJNA884104 22189 429 1.300562 5.57941098 Minisyncoccota bacterium 2053589 Bacteria Bacteria 201 8.97e-61   NR MFA6159318.1 2053589 g21446 i0 64.1 1.01398601398601 145 50 100 1 429 1 25 169 MFA6159318.1 protein kinase [Candidatus Paceibacterota bacterium] diamond 435 201 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
19987112 19987112 PRJNA884104_S_NODE_23696_length_416_cov_1.434402_g22953_i0 PRJNA884104 23696 416 1.434402 5.96711232 Minisyncoccota bacterium 2053589 Bacteria Bacteria 126 3.4899999999999996e-31   NR MDR3570663.1 2053589 g22953 i0 52 0.887019230769231 123 58 88 1 414 49 64 186 MDR3570663.1 beta-Ala-His dipeptidase [Candidatus Paceibacterota bacterium] diamond 369 126 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32205161 32205161 PRJNA884104_S_NODE_45798_length_308_cov_1.310638_g45055_i0 PRJNA884104 45798 308 1.310638 4.03676504 Minisyncoccota bacterium 2053589 Bacteria Bacteria 67.8 2.88e-12   NR MFA6094785.1 2053589 g45055 i0 53 0.642857142857143 66 30 63.3 1 109 303 4 69 MFA6094785.1 RNA-binding protein [Candidatus Paceibacterota bacterium] diamond 198 67.8 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium
32899432 32899432 PRJNA884104_S_NODE_47060_length_304_cov_1.995671_g46317_i0 PRJNA884104 47060 304 1.995671 6.06683984 Minisyncoccota bacterium 2053589 Bacteria Bacteria 51.6 5.76e-5   NR HEY4504339.1 2053589 g46317 i0 42.4 1.17434210526316 59 31 58.2 1 117 293 463 518 HEY4504339.1 DNA polymerase [Candidatus Paceibacterota bacterium] diamond 357 51.6 1 Bacteria Bacteria candidate phyla   Minisyncoccota         Minisyncoccota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;