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contig_metadata

21 rows where bioproject = "PRJNA883229", tax_kingdom = "Pseudomonadati" and tax_phylum = "Acidobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Acidobacteriota · 21 ✖

tax_kingdom 1

  • Pseudomonadati · 21 ✖

bioproject 1

  • PRJNA883229 · 21 ✖

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
4688303 4688303 PRJNA883229_P_NODE_13144_length_247_cov_0.896552_g13098_i0 PRJNA883229 13144 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 130 2.8200000000000002e-36   NR MBP1603840.1 1978231 g13098 i0 79.3 2.98785425101215 82 17 99.6 0 247 2 11 92 MBP1603840.1 tagH 4 [Acidobacteriota bacterium] diamond 738 130 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
13613522 13613522 PRJNA883229_P_NODE_10191_length_251_cov_0.876404_g10145_i0 PRJNA883229 10191 251 0.876404 2.19977404 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 163 1.93e-44   NR HLZ91280.1 3069120 g10145 i0 95.2 10.9123505976096 83 4 99.2 0 1 249 163 245 HLZ91280.1 response regulator [Candidatus Acidiferrum sp.] diamond 2739 163 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
14887962 14887962 PRJNA883229_P_NODE_16212_length_242_cov_0.923077_g16166_i0 PRJNA883229 16212 242 0.923077 2.23384634 uncultured Acidobacteriaceae bacterium 194844 Bacteria Bacteria 54.7 0.006   NTclustered gi|2874254114|emb|OY970199.1| 194844 g16166 i0 100 0.119834710743802 29 0 12 0 28 56 1212041 1212069 MAG: uncultured Acidobacteriaceae bacterium isolate MFD04463.bin.1.15 genome assembly, chromosome: 1 blastn 29 54.7 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae   uncultured Acidobacteriaceae bacterium
17438136 17438136 PRJNA883229_P_NODE_16534_length_242_cov_0.923077_g16488_i0 PRJNA883229 16534 242 0.923077 2.23384634 Terriglobia bacterium 2081523 Bacteria Bacteria 115 8.72e-31   NR MBZ5706065.1 2081523 g16488 i0 84.4 0.793388429752066 64 10 79.3 0 2 193 94 157 MBZ5706065.1 (2Fe-2S)-binding protein [Terriglobia bacterium] diamond 192 115 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia       Terriglobia bacterium
19986726 19986726 PRJNA883229_P_NODE_8976_length_253_cov_0.866667_g8930_i0 PRJNA883229 8976 253 0.866667 2.19266751 Acidobacteriota bacterium 1978231 Bacteria Bacteria 70.1 9.51e-12   NR MEP7117505.1 1978231 g8930 i0 80 0.533596837944664 45 9 53.4 0 137 3 5 49 MEP7117505.1 S9 family peptidase [Acidobacteriota bacterium] diamond 135 70.1 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
25086147 25086147 PRJNA883229_P_NODE_9780_length_252_cov_0.871508_g9734_i0 PRJNA883229 9780 252 0.871508 2.19620016 Bacteria 2 Bacteria Bacteria 116 3.57e-28   NR MBP1633793.1 1978231 g9734 i0 84.3 1.66666666666667 70 11 83.3 0 212 3 1 70 MBP1633793.1 glycerol-3-phosphate dehydrogenase [Acidobacteriota bacterium] diamond 420 116 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
26675215 26675215 PRJNA883229_P_NODE_6321_length_284_cov_1.189573_g6275_i0 PRJNA883229 6321 284 1.189573 3.37838732 Acidobacteriota bacterium 1978231 Bacteria Bacteria 183 1.12e-52   NR MBU6254618.1 1978231 g6275 i0 98.9 7.94366197183099 94 1 99.3 0 3 284 188 281 MBU6254618.1 transcription-repair coupling factor [Acidobacteriota bacterium] diamond 2256 183 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27244983 27244983 PRJNA883229_P_NODE_6863_length_277_cov_0.931373_g6817_i0 PRJNA883229 6863 277 0.931373 2.57990321 Acidobacteriota bacterium 1978231 Bacteria Bacteria 167 3.7700000000000003e-51   NR MBU6254508.1 1978231 g6817 i0 97.4 0.844765342960289 78 2 84.5 0 43 276 1 78 MBU6254508.1 GNAT family N-acetyltransferase [Acidobacteriota bacterium] diamond 234 167 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27379624 27379624 PRJNA883229_P_NODE_16003_length_243_cov_0.917647_g15957_i0 PRJNA883229 16003 243 0.917647 2.22988221 Bacteria 2 Bacteria Bacteria 134 1.57e-34   NR MCX6615662.1 1978231 g15957 i0 78.5 6.82716049382716 79 16 97.5 1 241 5 293 370 MCX6615662.1 PPC domain-containing protein [Acidobacteriota bacterium] diamond 1659 134 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27411246 27411246 PRJNA883229_P_NODE_12783_length_247_cov_0.896552_g12737_i0 PRJNA883229 12783 247 0.896552 2.21448344 Bacteria 2 Bacteria Bacteria 94 1.42e-20   NR MDE3227285.1 1978231 g12737 i0 92.9 2.7085020242915 56 3 66.8 1 2 166 309 364 MDE3227285.1 trigger factor [Acidobacteriota bacterium] diamond 669 94 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
27907929 27907929 PRJNA883229_P_NODE_4045_length_334_cov_0.896552_g3999_i0 PRJNA883229 4045 334 0.896552 2.99448368 Vicinamibacterales bacterium 2910147 Bacteria Bacteria 84.7 9.89e-17   NR MDP7693371.1 2910147 g3999 i0 40.2 3.03592814371257 112 66 99.7 1 333 1 206 317 MDP7693371.1 hypothetical protein [Vicinamibacterales bacterium] diamond 1014 84.7 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria Vicinamibacterales     Vicinamibacterales bacterium
29076591 29076591 PRJNA883229_P_NODE_11828_length_249_cov_0.886364_g11782_i0 PRJNA883229 11828 249 0.886364 2.20704636 Vicinamibacteria bacterium 2793154 Bacteria Bacteria 153 5.69e-41   NR HYN01226.1 2793154 g11782 i0 90.2 0.987951807228916 82 8 98.8 0 3 248 404 485 HYN01226.1 protein kinase [Vicinamibacteria bacterium] diamond 246 153 1 Bacteria   Pseudomonadati Acidobacteriota Vicinamibacteria       Vicinamibacteria bacterium
29265703 29265703 PRJNA883229_P_NODE_12549_length_248_cov_0.891429_g12503_i0 PRJNA883229 12549 248 0.891429 2.21074392 Candidatus Acidiferrum sp. 3069120 Bacteria Bacteria 154 4.27e-46   NR HEV2101893.1 3069120 g12503 i0 90.2 0.991935483870968 82 8 99.2 0 247 2 48 129 HEV2101893.1 low molecular weight phosphatase family protein [Candidatus Acidiferrum sp.] diamond 246 154 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Candidatus Acidiferrales   Candidatus Acidiferrum Candidatus Acidiferrum sp.
29454951 29454951 PRJNA883229_P_NODE_11490_length_249_cov_0.886364_g11444_i0 PRJNA883229 11490 249 0.886364 2.20704636 Chloracidobacterium sp. 2099375 Bacteria Bacteria 75.9 9.59e-15   NR MBK7804311.1 2099375 g11444 i0 44 1.01204819277108 84 45 98.8 1 248 3 88 171 MBK7804311.1 deoxynucleotide monophosphate kinase [Chloracidobacterium sp.] diamond 252 75.9 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales Acidobacteriaceae Chloracidobacterium Chloracidobacterium sp.
29770928 29770928 PRJNA883229_P_NODE_15331_length_244_cov_0.912281_g15285_i0 PRJNA883229 15331 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 144 9.63e-38   NR MEW5984088.1 1978231 g15285 i0 81.3 0.983606557377049 80 15 98.4 0 3 242 222 301 MEW5984088.1 NAD(P)H-dependent oxidoreductase subunit E [Acidobacteriota bacterium] diamond 240 144 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
29865807 29865807 PRJNA883229_P_NODE_10771_length_250_cov_0.881356_g10725_i0 PRJNA883229 10771 250 0.881356 2.20339 Pyrinomonadaceae bacterium 2283092 Bacteria Bacteria 53.9 4.47e-6   NR HJU91993.1 2283092 g10725 i0 43.8 0.876 73 34 87.6 2 223 5 26 91 HJU91993.1 WG repeat-containing protein [Pyrinomonadaceae bacterium] diamond 219 53.9 1 Bacteria   Pseudomonadati Acidobacteriota Blastocatellia Blastocatellales Pyrinomonadaceae   Pyrinomonadaceae bacterium
30086884 30086884 PRJNA883229_P_NODE_15972_length_243_cov_0.917647_g15926_i0 PRJNA883229 15972 243 0.917647 2.22988221 Acidobacteriota bacterium 1978231 Bacteria Bacteria 163 8.759999999999999e-47   NR MBU6243179.1 1978231 g15926 i0 100 0.987654320987654 80 0 98.8 0 242 3 90 169 MBU6243179.1 phosphomannomutase/phosphoglucomutase [Acidobacteriota bacterium] diamond 240 163 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
30189628 30189628 PRJNA883229_P_NODE_5152_length_305_cov_1.008621_g5106_i0 PRJNA883229 5152 305 1.008621 3.07629405 Bacteria 2 Bacteria Bacteria 140 8.62e-38   NR MBU6253875.1 1978231 g5106 i0 100 1.5344262295082 78 0 76.7 0 305 72 320 397 MBU6253875.1 murein biosynthesis integral membrane protein MurJ [Acidobacteriota bacterium] diamond 468 140 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium
31003299 31003299 PRJNA883229_P_NODE_15954_length_243_cov_0.917647_g15908_i0 PRJNA883229 15954 243 0.917647 2.22988221 Geothrix sp. 1962974 Bacteria Bacteria 42.4 0.0497   NR MCC6512735.1 1962974 g15908 i0 61.1 0.444444444444444 36 13 44.4 1 65 172 223 257 MCC6512735.1 ammonium transporter [Geothrix sp.] diamond 108 42.4 1 Bacteria   Pseudomonadati Acidobacteriota Holophagae Holophagales Holophagaceae Geothrix Geothrix sp.
31667155 31667155 PRJNA883229_P_NODE_8217_length_257_cov_1.690217_g8171_i0 PRJNA883229 8217 257 1.690217 4.34385769 Terriglobales bacterium 2282142 Bacteria Bacteria 148 7.709999999999997e-42   NR HEX6906516.1 2282142 g8171 i0 100 0.852140077821012 73 0 85.2 0 255 37 239 311 HEX6906516.1 ROK family protein [Terriglobales bacterium] diamond 219 148 1 Bacteria   Pseudomonadati Acidobacteriota Terriglobia Terriglobales     Terriglobales bacterium
32584865 32584865 PRJNA883229_P_NODE_15039_length_244_cov_0.912281_g14993_i0 PRJNA883229 15039 244 0.912281 2.22596564 Acidobacteriota bacterium 1978231 Bacteria Bacteria 150 1.1399999999999999e-40   NR MCX6551271.1 1978231 g14993 i0 92.6 0.995901639344262 81 6 99.6 0 1 243 266 346 MCX6551271.1 carboxylesterase family protein [Acidobacteriota bacterium] diamond 243 150 1 Bacteria   Pseudomonadati Acidobacteriota         Acidobacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;