RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA883229", tax_kingdom = "Methanobacteriati" and tax_phylum = "Thermoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Thermoplasmatota · 3 ✖

tax_kingdom 1

  • Methanobacteriati · 3 ✖

bioproject 1

  • PRJNA883229 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26706889 26706889 PRJNA883229_P_NODE_16621_length_242_cov_0.923077_g16575_i0 PRJNA883229 16621 242 0.923077 2.23384634 Candidatus Methanomethylophilaceae archaeon 2517205 Archaea Archaea 49.3 1.76e-4   NR MBR4686291.1 2517205 g16575 i0 83.3 1.16528925619835 24 4 29.8 0 240 169 456 479 MBR4686291.1 nicotinate phosphoribosyltransferase [Candidatus Methanomethylophilaceae archaeon] diamond 282 49.3 1 Archaea   Methanobacteriati Thermoplasmatota Thermoplasmata Methanomassiliicoccales Methanomethylophilaceae   Candidatus Methanomethylophilaceae archaeon
29739235 29739235 PRJNA883229_P_NODE_8610_length_253_cov_0.866667_g8564_i0 PRJNA883229 8610 253 0.866667 2.19266751 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 47.4 9.74e-4   NR MEK9697479.1 2163009 g8564 i0 37.1 1.05533596837945 89 46 93.7 2 14 250 76 164 MEK9697479.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 267 47.4 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon
31983490 31983490 PRJNA883229_P_NODE_12178_length_248_cov_0.891429_g12132_i0 PRJNA883229 12178 248 0.891429 2.21074392 Candidatus Poseidoniales archaeon 2163009 Archaea Archaea 79 5.71e-17   NR MEK9699007.1 2163009 g12132 i0 51.9 0.955645161290323 79 38 95.6 0 248 12 2 80 MEK9699007.1 hypothetical protein [Candidatus Poseidoniales archaeon] diamond 237 79 1 Archaea   Methanobacteriati Thermoplasmatota Candidatus Poseidoniia Candidatus Poseidoniales     Candidatus Poseidoniales archaeon

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;