RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA883229", tax_clade = "Stenosarchaea group" and tax_phylum = "Methanobacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Methanobacteriota · 2 ✖

tax_kingdom 1

tax_clade 1

  • Stenosarchaea group · 2 ✖

bioproject 1

  • PRJNA883229 · 2 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
20367458 20367458 PRJNA883229_P_NODE_5996_length_289_cov_1.277778_g5950_i0 PRJNA883229 5996 289 1.277778 3.69277842 Methanoculleus 45989 Archaea Archaea 78.7 4.41e-10   NTclustered gi|2323247744|gb|CP109831.1| 204050 g5950 i0 86.957 0.692041522491349 69 9 24 0 13 81 1659696 1659764 Methanoculleus submarinus strain DSM 15122 chromosome, complete genome blastn 200 78.7 1 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus submarinus
25085993 25085993 PRJNA883229_P_NODE_12740_length_247_cov_0.896552_g12694_i0 PRJNA883229 12740 247 0.896552 2.21448344 Methanoculleus 45989 Archaea Archaea 77.4 1.83e-14   NR MCK9307609.1 90427 g12694 i0 62.1 4.22672064777328 58 21 69.2 1 3 173 325 382 MCK9307609.1 IS200/IS605 family element RNA-guided endonuclease TnpB [Methanoculleus sp.] diamond 1044 77.8 0.994858611825193 Archaea Stenosarchaea group Methanobacteriati Methanobacteriota Methanomicrobia Methanomicrobiales Methanomicrobiaceae Methanoculleus Methanoculleus sp.

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;