RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA883229", tax_clade = "Opisthokonta" and tax_phylum = "Platyhelminthes"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Platyhelminthes · 3 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 3 ✖

bioproject 1

  • PRJNA883229 · 3 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
7238106 7238106 PRJNA883229_P_NODE_16806_length_233_cov_2.162500_g16760_i0 PRJNA883229 16806 233 2.1625 5.038625 Stenostomum sthenum 1611831 Platyhelminthes Platyhelminthes 392 1.08e-104   NTclustered gi|1215837197|ref|NC_035256.1| 1611831 g16760 i0 96.996 2.00429184549356 233 7 100 0 1 233 8573 8805 Stenostomum sthenum mitochondrion, complete genome blastn 467 392 1 Eukaryota Opisthokonta Metazoa Platyhelminthes     Stenostomidae Stenostomum Stenostomum sthenum
30560671 30560671 PRJNA883229_P_NODE_8633_length_253_cov_0.866667_g8587_i0 PRJNA883229 8633 253 0.866667 2.19266751 Macrostomum lignano 282301 Platyhelminthes Platyhelminthes 134 1.14e-36   NR PAA48188.1 282301 g8587 i0 75 0.99604743083004 84 21 99.6 0 1 252 13 96 PAA48188.1 hypothetical protein BOX15_Mlig010121g3 [Macrostomum lignano] diamond 252 134 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Rhabditophora Macrostomida Macrostomidae Macrostomum Macrostomum lignano
32054745 32054745 PRJNA883229_P_NODE_3498_length_352_cov_1.394265_g3452_i0 PRJNA883229 3498 352 1.394265 4.9078128 Metazoa 33208 Platyhelminthes Platyhelminthes 231 3.33e-75   NR Q26537.1 6183 g3452 i0 100 3.9375 116 0 98.9 0 3 350 68 183 Q26537.1 RecName: Full=14-3-3 protein homolog 2; Short=14-3-3-2 [Schistosoma mansoni] diamond 1386 231 1 Eukaryota Opisthokonta Metazoa Platyhelminthes Trematoda Strigeidida Schistosomatidae Schistosoma Schistosoma mansoni

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;