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contig_metadata

14 rows where bioproject = "PRJNA883229", tax_clade = "Opisthokonta" and tax_phylum = "Nematoda"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Nematoda · 14 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 14 ✖

bioproject 1

  • PRJNA883229 · 14 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
8512806 8512806 PRJNA883229_P_NODE_12547_length_248_cov_0.891429_g12501_i0 PRJNA883229 12547 248 0.891429 2.21074392 Aphelenchoides avenae 70226 Nematoda Nematoda 166 2.19e-45   NR KAH7729562.1 70226 g12501 i0 92.7 9.91935483870968 82 6 99.2 0 247 2 2604 2685 KAH7729562.1 HECTUBA and WWE domain containing 1 [Aphelenchoides avenae] diamond 2460 166 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
8512923 8512923 PRJNA883229_P_NODE_7767_length_263_cov_2.047368_g7721_i0 PRJNA883229 7767 263 2.047368 5.38457784 Teratorhabditis mariannae 466949 Nematoda Nematoda 187 6.309999999999998e-43   NTclustered gi|156915107|gb|EF990721.1| 466949 g7721 i0 84.896 56.8250950570342 192 21 71 7 1 187 2966 3154 Teratorhabditis mariannae strain SB170 28S large subunit ribosomal RNA gene, partial sequence blastn 14945 187 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Teratorhabditis Teratorhabditis mariannae
8512930 8512930 PRJNA883229_P_NODE_8507_length_253_cov_1.733333_g8461_i0 PRJNA883229 8507 253 1.733333 4.38533249 Rhabditida 6236 Nematoda Nematoda 140 5.81e-41   NR VDN50060.1 318479 g8461 i0 82.1 1.87351778656126 78 14 92.5 0 235 2 1 78 VDN50060.1 unnamed protein product [Dracunculus medinensis] diamond 474 140 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Dracunculidae Dracunculus Dracunculus medinensis
21643343 21643343 PRJNA883229_P_NODE_9997_length_251_cov_0.876404_g9951_i0 PRJNA883229 9997 251 0.876404 2.19977404 Aphelenchoides avenae 70226 Nematoda Nematoda 106 1.49e-26   NR KAH7728507.1 70226 g9951 i0 71.1 0.908366533864542 76 22 90.8 0 15 242 136 211 KAH7728507.1 50S ribosomal protein L13e [Aphelenchoides avenae] diamond 228 106 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
26833937 26833937 PRJNA883229_P_NODE_10961_length_250_cov_0.881356_g10915_i0 PRJNA883229 10961 250 0.881356 2.20339 Caenorhabditis brenneri 135651 Nematoda Nematoda 74.7 4.49e-14   NR ACD12696.1 135651 g10915 i0 48.5 5.412 66 33 79.2 1 204 7 39 103 ACD12696.1 initiation factor, partial [Caenorhabditis brenneri] diamond 1353 74.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis brenneri
27213232 27213232 PRJNA883229_P_NODE_8882_length_253_cov_0.866667_g8836_i0 PRJNA883229 8882 253 0.866667 2.19266751 Aphelenchoides avenae 70226 Nematoda Nematoda 90.1 2.85e-21   NR KAH7706254.1 70226 g8836 i0 55 1.93280632411067 80 33 94.9 2 252 13 8 84 KAH7706254.1 Protein SUP-1 [Aphelenchoides avenae] diamond 489 90.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
27600606 27600606 PRJNA883229_P_NODE_10504_length_250_cov_1.762712_g10458_i0 PRJNA883229 10504 250 1.762712 4.40678 Meloidogyne 189290 Nematoda Nematoda 150 1.25e-41   NR KAF7637933.1 189291 g10458 i0 84.3 8.916 83 13 99.6 0 250 2 271 353 KAF7637933.1 hypothetical protein Mgra_00002636 [Meloidogyne graminicola] diamond 2229 150 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Meloidogynidae Meloidogyne Meloidogyne graminicola
27813725 27813725 PRJNA883229_P_NODE_10644_length_250_cov_0.881356_g10598_i0 PRJNA883229 10644 250 0.881356 2.20339 Ditylenchus destructor 166010 Nematoda Nematoda 85.1 2.67e-17   NR KAI1732175.1 166010 g10598 i0 57.8 0.768 64 27 76.8 0 193 2 1 64 KAI1732175.1 ras association domain-containing protein 7 [Ditylenchus destructor] diamond 192 85.1 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
28042498 28042498 PRJNA883229_P_NODE_10985_length_250_cov_0.881356_g10939_i0 PRJNA883229 10985 250 0.881356 2.20339 Rhabditida 6236 Nematoda Nematoda 99 1.98e-22   NR VDK57056.1 6269 g10939 i0 90.4 8.88 52 5 62.4 0 3 158 63 114 VDK57056.1 unnamed protein product [Anisakis simplex] diamond 2220 99 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anisakidae Anisakis Anisakis simplex
29431470 29431470 PRJNA883229_P_NODE_4629_length_317_cov_0.959016_g4583_i0 PRJNA883229 4629 317 0.959016 3.04008072 Angiostrongylus 6312 Nematoda Nematoda 118 1.03e-28   NR KAE9419430.1 6313 g4583 i0 66.7 1.9211356466877 102 31 93.7 2 3 299 409 510 KAE9419430.1 hypothetical protein Angca_007565, partial [Angiostrongylus cantonensis] diamond 609 119 0.991596638655462 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Metastrongylidae Angiostrongylus Angiostrongylus cantonensis
29778986 29778986 PRJNA883229_P_NODE_13551_length_246_cov_0.901734_g13505_i0 PRJNA883229 13551 246 0.901734 2.21826564 Caenorhabditis 6237 Nematoda Nematoda 124 4.42e-33   NR CAB3403121.1 2654633 g13505 i0 71.3 2.9390243902439 80 23 97.6 0 7 246 152 231 CAB3403121.1 unnamed protein product [Caenorhabditis bovis] diamond 723 124 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Rhabditidae Caenorhabditis Caenorhabditis bovis
30316602 30316602 PRJNA883229_P_NODE_9932_length_251_cov_0.876404_g9886_i0 PRJNA883229 9932 251 0.876404 2.19977404 Rhabditida 6236 Nematoda Nematoda 113 3.07e-29   NR KAI1723810.1 166010 g9886 i0 66.7 3.72908366533865 78 26 93.2 0 18 251 1 78 KAI1723810.1 ATP synthase subunit C domain-containing protein [Ditylenchus destructor] diamond 936 114 0.991228070175439 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Anguinidae Ditylenchus Ditylenchus destructor
30537240 30537240 PRJNA883229_P_NODE_11173_length_250_cov_0.881356_g11127_i0 PRJNA883229 11173 250 0.881356 2.20339 Rhabditida 6236 Nematoda Nematoda 135 8.139999999999998e-35   NR KAH7721995.1 70226 g11127 i0 74.4 9.84 82 21 98.4 0 248 3 570 651 KAH7721995.1 Glycine cleavage T-protein [Aphelenchoides avenae] diamond 2460 136 0.992647058823529 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae
30560655 30560655 PRJNA883229_P_NODE_14333_length_245_cov_0.906977_g14287_i0 PRJNA883229 14333 245 0.906977 2.22209365 Aphelenchoides avenae 70226 Nematoda Nematoda 59.7 8.52e-9   NR KAH7727609.1 70226 g14287 i0 56.5 1.1265306122449 46 20 56.3 0 240 103 118 163 KAH7727609.1 Protein Y48A6B.3 [Aphelenchoides avenae] diamond 276 59.7 1 Eukaryota Opisthokonta Metazoa Nematoda Chromadorea Rhabditida Aphelenchoididae Aphelenchoides Aphelenchoides avenae

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;