RNAquarium Metadata Server
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contig_metadata

4 rows where bioproject = "PRJNA883229", tax_clade = "Opisthokonta" and tax_phylum = "Mucoromycota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 4 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 4 ✖

bioproject 1

  • PRJNA883229 · 4 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
22536649 22536649 PRJNA883229_P_NODE_12978_length_247_cov_0.896552_g12932_i0 PRJNA883229 12978 247 0.896552 2.21448344 Gilbertella persicaria 101096 Fungi Fungi 222 1.61e-53   NTclustered gi|2323716567|ref|XM_051576246.1| 101096 g12932 i0 83.065 37.4736842105263 248 38 99 4 2 247 620 375 Gilbertella persicaria isocitrate dehydrogenase [NADP] (B0P05DRAFT_524812), mRNA blastn 9256 222 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Choanephoraceae Gilbertella Gilbertella persicaria
23812158 23812158 PRJNA883229_P_NODE_12819_length_247_cov_0.896552_g12773_i0 PRJNA883229 12819 247 0.896552 2.21448344 Lichtheimia ornata 688661 Fungi Fungi 174 4.57e-39   NTclustered gi|2553566207|ref|XM_058484142.1| 688661 g12773 i0 81.818 82.3846153846154 209 37 85 1 37 245 400 193 Lichtheimia ornata heat shock protein HSS1 (O0I10_004077), partial mRNA blastn 20349 174 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Lichtheimiaceae Lichtheimia Lichtheimia ornata
25086002 25086002 PRJNA883229_P_NODE_13360_length_246_cov_0.901734_g13314_i0 PRJNA883229 13360 246 0.901734 2.21826564 Rhizophagus irregularis 588596 Fungi Fungi 62.1 3.69e-5   NTclustered gi|2749774926|ref|XM_066139560.1| 588596 g13314 i0 100 3.41869918699187 33 0 13 0 175 207 164 196 Rhizophagus irregularis uncharacterized protein (OCT59_001431), partial mRNA blastn 841 62.1 1 Eukaryota Opisthokonta Fungi Mucoromycota Glomeromycetes Glomerales Glomeraceae Rhizophagus Rhizophagus irregularis
27750597 27750597 PRJNA883229_P_NODE_7804_length_263_cov_1.268421_g7758_i0 PRJNA883229 7804 263 1.268421 3.33594723 Rhizopus azygosporus 86630 Fungi Fungi 98.2 1.49e-21   NR RCH92246.1 86630 g7758 i0 57.5 4.96197718631179 87 37 99.2 0 261 1 45 131 RCH92246.1 Vacuolar protein sorting-associated protein 51 [Rhizopus azygosporus] diamond 1305 98.2 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Rhizopodaceae Rhizopus Rhizopus azygosporus

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;