RNAquarium Metadata Server
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contig_metadata

6 rows where bioproject = "PRJNA883229", tax_clade = "FCB group" and tax_phylum = "Ignavibacteriota"

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analysis 2

tax_superkingdom 1

tax_phylum 1

  • Ignavibacteriota · 6 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 6 ✖

bioproject 1

  • PRJNA883229 · 6 ✖
Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
16162660 16162660 PRJNA883229_P_NODE_16693_length_242_cov_0.923077_g16647_i0 PRJNA883229 16693 242 0.923077 2.23384634 Melioribacteraceae bacterium 2614255 Bacteria Bacteria 62.1 3.62e-5   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g16647 i0 94.872 3.6198347107438 39 2 19 0 103 141 1132434 1132396 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 876 62.1 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
25467755 25467755 PRJNA883229_P_NODE_14080_length_245_cov_0.906977_g14034_i0 PRJNA883229 14080 245 0.906977 2.22209365 Pseudomonadati 3379134 Bacteria Bacteria 102 2.16e-17   NTclustered gi|2621786307|emb|OY782765.1| 2614255 g14034 i0 96.721 24.930612244898 61 2 25 0 185 245 2570708 2570648 MAG: Melioribacteraceae bacterium isolate b49f5fa7-6043-4eb4-88a3-53a29b1f0925 genome assembly, chromosome: 1 blastn 6108 102 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Melioribacteraceae   Melioribacteraceae bacterium
30623919 30623919 PRJNA883229_P_NODE_13693_length_246_cov_0.901734_g13647_i0 PRJNA883229 13693 246 0.901734 2.21826564 Ignavibacterium sp. 2651167 Bacteria Bacteria 173 4.629999999999999e-48   NR MDD5609625.1 2651167 g13647 i0 100 2.96341463414634 81 0 98.8 0 245 3 351 431 MDD5609625.1 C25 family cysteine peptidase [Ignavibacterium sp.] diamond 729 173 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae Ignavibacterium Ignavibacterium sp.
30687167 30687167 PRJNA883229_P_NODE_14413_length_245_cov_0.906977_g14367_i0 PRJNA883229 14413 245 0.906977 2.22209365 Ignavibacteriota bacterium 2026749 Bacteria Bacteria 61.6 3.48e-10   NR RPI13088.1 2026749 g14367 i0 54.2 2.30204081632653 48 22 58.8 0 243 100 40 87 RPI13088.1 MAG: hypothetical protein EHM58_19165 [Ignavibacteriota bacterium] diamond 564 61.6 1 Bacteria FCB group Pseudomonadati Ignavibacteriota         Ignavibacteriota bacterium
31667156 31667156 PRJNA883229_P_NODE_9697_length_252_cov_0.871508_g9651_i0 PRJNA883229 9697 252 0.871508 2.19620016 Ignavibacteria bacterium 2053306 Bacteria Bacteria 127 5.12e-32   NR MBM4179687.1 2053306 g9651 i0 76 1.71428571428571 75 18 89.3 0 247 23 771 845 MBM4179687.1 hypothetical protein [Ignavibacteria bacterium] diamond 432 127 1 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria       Ignavibacteria bacterium
32054746 32054746 PRJNA883229_P_NODE_8718_length_253_cov_0.866667_g8672_i0 PRJNA883229 8718 253 0.866667 2.19266751 Ignavibacterium 795750 Bacteria Bacteria 101 2.98e-23   NR HMN23890.1 2651163 g8672 i0 60 1.83794466403162 80 31 93.7 1 1 237 319 398 HMN23890.1 glycosyltransferase family 9 protein [Ignavibacteriaceae bacterium] diamond 465 102 0.990196078431373 Bacteria FCB group Pseudomonadati Ignavibacteriota Ignavibacteria Ignavibacteriales Ignavibacteriaceae   Ignavibacteriaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;