RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA883229", tax_clade = "FCB group" and tax_phylum = "Fidelibacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fidelibacterota · 3 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 3 ✖

bioproject 1

  • PRJNA883229 · 3 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27529315 27529315 PRJNA883229_P_NODE_9823_length_251_cov_1.724719_g9777_i0 PRJNA883229 9823 251 1.724719 4.32904469 Fidelibacterota bacterium 2026760 Bacteria Bacteria 43.1 0.0298   NR MEA2077421.1 2026760 g9777 i0 37.1 0.741035856573705 62 37 74.1 1 237 52 82 141 MEA2077421.1 peptidylprolyl isomerase [Fidelibacterota bacterium] diamond 186 43.1 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
27876612 27876612 PRJNA883229_P_NODE_8925_length_253_cov_0.866667_g8879_i0 PRJNA883229 8925 253 0.866667 2.19266751 Fidelibacterota bacterium 2026760 Bacteria Bacteria 91.3 1.62e-20   NR MDC1037984.1 2026760 g8879 i0 48.8 0.99604743083004 84 39 94.9 1 252 13 117 200 MDC1037984.1 class I SAM-dependent methyltransferase [Fidelibacterota bacterium] diamond 252 91.3 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium
30813616 30813616 PRJNA883229_P_NODE_8894_length_253_cov_0.866667_g8848_i0 PRJNA883229 8894 253 0.866667 2.19266751 Fidelibacterota bacterium 2026760 Bacteria Bacteria 99.8 7.98e-23   NR MCJ7801580.1 2026760 g8848 i0 58.3 0.853754940711462 72 30 85.4 0 5 220 268 339 MCJ7801580.1 zinc-ribbon domain-containing protein [Fidelibacterota bacterium] diamond 216 99.8 1 Bacteria FCB group Pseudomonadati Fidelibacterota         Fidelibacterota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;