contig_metadata
2 rows where bioproject = "PRJNA883229", tax_clade = "Bacteria candidate phyla" and tax_phylum = "Candidatus Peregrinibacteriota"
This data as json, CSV (advanced)
| Link | rowid ▼ | query | bioproject | node | length | coverage | rel_abundance | taxname_lca | taxid_lca | taxoncategory | taxoncategorysimple | bits | evalue | lowcoverage_flag | analysis_used | target | taxid | gene | allele | pident | sumperc_cov | alnlen | mismatch | qcov | gapopen | qstart | qend | tstart | tend | target_title | analysis | sumalnlen | maxbits | bits_percmax | tax_superkingdom | tax_clade | tax_kingdom | tax_phylum | tax_class | tax_order | tax_family | tax_genus | tax_species |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8512796 | 8512796 | PRJNA883229_P_NODE_11587_length_249_cov_0.886364_g11541_i0 | PRJNA883229 | 11587 | 249 | 0.886364 | 2.20704636 | Candidatus Peribacteria bacterium | 2053688 | Bacteria | Bacteria | 115 | 7.800000000000001e-28 | NR | MSR67607.1 | 2053688 | g11541 | i0 | 72.7 | 1.06024096385542 | 88 | 18 | 98.8 | 1 | 246 | 1 | 579 | 666 | MSR67607.1 preprotein translocase subunit SecA [Candidatus Peribacteria bacterium] | diamond | 264 | 115 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peribacteria | Candidatus Peribacteria bacterium | |||||
| 31604035 | 31604035 | PRJNA883229_P_NODE_11116_length_250_cov_0.881356_g11070_i0 | PRJNA883229 | 11116 | 250 | 0.881356 | 2.20339 | Candidatus Peregrinibacteria bacterium | 2030811 | Bacteria | Bacteria | 115 | 1.18e-29 | NR | MDO8648519.1 | 2030811 | g11070 | i0 | 70.5 | 0.936 | 78 | 23 | 93.6 | 0 | 15 | 248 | 125 | 202 | MDO8648519.1 endonuclease III [Candidatus Peregrinibacteria bacterium] | diamond | 234 | 115 | 1 | Bacteria | Bacteria candidate phyla | Candidatus Peregrinibacteriota | Candidatus Peregrinibacteria bacterium |
Advanced export
JSON shape: default, array, newline-delimited
CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;