RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA881257" and tax_phylum = "Zoopagomycota"

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tax_superkingdom 1

tax_phylum 1

  • Zoopagomycota · 2 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
3792603 3792603 PRJNA881257_P_NODE_14943_length_168_cov_0.873950_g14698_i0 PRJNA881257 14943 168 0.87395 1.468236 Entomophthoraceae 34481 Fungi Fungi 279 5.95e-71   NTclustered gi|18033614|gb|AF351134.1|AF351134 176680 g14698 i0 96.988 66.8452380952381 166 5 99 0 3 168 625 790 Furia ithacensis small subunit ribosomal RNA gene, partial sequence blastn 11230 279 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Furia Furia ithacensis
16161300 16161300 PRJNA881257_P_NODE_7653_length_256_cov_1.516908_g7408_i0 PRJNA881257 7653 256 1.516908 3.88328448 Pandora gloeospora 3234230 Fungi Fungi 462 9.07e-126   NTclustered gi|2770805132|gb|PQ038061.1| 3234230 g7408 i0 99.219 76.71875 256 2 100 0 1 256 264 9 Pandora gloeospora isolate ARSEF 13406 large subunit ribosomal RNA gene, partial sequence blastn 19640 462 1 Eukaryota Opisthokonta Fungi Zoopagomycota Entomophthoromycetes Entomophthorales Entomophthoraceae Pandora Pandora gloeospora

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;