RNAquarium Metadata Server
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contig_metadata

3 rows where bioproject = "PRJNA881257", tax_kingdom = "Pseudomonadati" and tax_phylum = "Abditibacteriota"

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tax_superkingdom 1

tax_phylum 1

  • Abditibacteriota · 3 ✖

tax_kingdom 1

  • Pseudomonadati · 3 ✖

bioproject 1

  • PRJNA881257 · 3 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5961855 5961855 PRJNA881257_P_NODE_3025_length_481_cov_1.800926_g2783_i0 PRJNA881257 3025 481 1.800926 8.66245406 Abditibacteriota bacterium 2783868 Bacteria Bacteria 475 2.3499999999999998e-129   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g2783 i0 84.787 58.8232848232848 493 54 100 16 1 481 2850712 2851195 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 28294 475 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
16161322 16161322 PRJNA881257_P_NODE_9813_length_212_cov_2.220859_g9568_i0 PRJNA881257 9813 212 2.220859 4.70822108 Abditibacteriota bacterium 2783868 Bacteria Bacteria 339 1.28e-88   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g9568 i0 95.714 144.787735849057 210 9 99 0 1 210 2853138 2852929 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 30695 339 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium
23810822 23810822 PRJNA881257_P_NODE_17779_length_162_cov_2.026549_g17534_i0 PRJNA881257 17779 162 2.026549 3.28300938 Abditibacteriota bacterium 2783868 Bacteria Bacteria 217 4.5199999999999996e-52   NTclustered gi|2215576334|dbj|AP024152.1| 2783868 g17534 i0 96.212 2.43827160493827 132 5 81 0 10 141 2852059 2851928 Abditibacteriota bacterium IAD-21 DNA, complete genome blastn 395 217 1 Bacteria   Pseudomonadati Abditibacteriota         Abditibacteriota bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;