RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA881257", tax_kingdom = "Fungi" and tax_phylum = "Mucoromycota"

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tax_superkingdom 1

tax_phylum 1

  • Mucoromycota · 2 ✖

tax_kingdom 1

  • Fungi · 2 ✖

tax_clade 1

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
26611979 26611979 PRJNA881257_P_NODE_5121_length_337_cov_4.958333_g4877_i0 PRJNA881257 5121 337 4.958333 16.70958221 Mortierella alpina 64518 Fungi Fungi 43.9 0.0436   NR KAF9963164.1 64518 g4877 i0 37.5 0.498516320474777 56 35 49.9 0 210 43 230 285 KAF9963164.1 MutS protein msh5 [Mortierella alpina] diamond 168 43.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mortierellomycetes Mortierellales Mortierellaceae Mortierella Mortierella alpina
32553374 32553374 PRJNA881257_P_NODE_839_length_934_cov_2.375141_g681_i0 PRJNA881257 839 934 2.375141 22.18381694 Mycotypha africana 64632 Fungi Fungi 65.9 8.56e-8   NR XP_052937599.1 64632 g681 i0 33.9 0.38865096359743 121 77 38.2 2 772 416 485 604 XP_052937599.1 alanyl-tRNA synthetase [Mycotypha africana] diamond 363 65.9 1 Eukaryota Opisthokonta Fungi Mucoromycota Mucoromycetes Mucorales Mycotyphaceae Mycotypha Mycotypha africana

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;