RNAquarium Metadata Server
Institute Website Terms of Use Privacy Policy

contig_metadata

2 rows where bioproject = "PRJNA881257", tax_kingdom = "Bacillati" and tax_phylum = "Chloroflexota"

✎ View and edit SQL

This data as json, CSV (advanced)

tax_superkingdom 1

tax_phylum 1

  • Chloroflexota · 2 ✖

tax_kingdom 1

  • Bacillati · 2 ✖

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
5961832 5961832 PRJNA881257_P_NODE_16445_length_165_cov_0.896552_g16200_i0 PRJNA881257 16445 165 0.896552 1.4793108 Chloroflexota bacterium 2026724 Bacteria Bacteria 113 2.14e-29   NR MBA2263634.1 2026724 g16200 i0 94.5 3 55 3 100 0 1 165 23 77 MBA2263634.1 LamB/YcsF family protein [Chloroflexota bacterium] diamond 495 113 1 Bacteria   Bacillati Chloroflexota         Chloroflexota bacterium
27719165 27719165 PRJNA881257_P_NODE_4324_length_379_cov_1.381818_g4080_i0 PRJNA881257 4324 379 1.381818 5.23709022 Anaerolineae bacterium 2052143 Bacteria Bacteria 45.1 0.0237   NR NIN68027.1 2052143 g4080 i0 31 0.66490765171504 84 57 65.7 1 130 378 68 151 NIN68027.1 hypothetical protein [Anaerolineae bacterium] diamond 252 45.1 1 Bacteria   Bacillati Chloroflexota Anaerolineae       Anaerolineae bacterium

Advanced export

JSON shape: default, array, newline-delimited

CSV options: 

CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;