RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA881257", tax_clade = "Opisthokonta" and tax_phylum = "Annelida"

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tax_superkingdom 1

tax_phylum 1

  • Annelida · 2 ✖

tax_kingdom 1

tax_clade 1

  • Opisthokonta · 2 ✖

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
27213185 27213185 PRJNA881257_P_NODE_5922_length_303_cov_1.838583_g5678_i0 PRJNA881257 5922 303 1.838583 5.57090649 Dimorphilus gyrociliatus 2664684 Annelida Annelida 50.4 3.67e-5   NR CAD5126479.1 2664684 g5678 i0 75 0.396039603960396 40 10 39.6 0 302 183 4 43 CAD5126479.1 unnamed protein product [Dimorphilus gyrociliatus] diamond 120 50.4 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta   Dinophilidae Dimorphilus Dimorphilus gyrociliatus
31327196 31327196 PRJNA881257_P_NODE_3055_length_479_cov_2.127907_g2813_i0 PRJNA881257 3055 479 2.127907 10.19267453 Metazoa 33208 Annelida Annelida 46.2 0.0253   NR KAK2159237.1 53620 g2813 i0 69 0.576200417536534 29 9 18.2 0 475 389 1439 1467 KAK2159237.1 hypothetical protein LSH36_156g11016 [Paralvinella palmiformis] diamond 276 46.2 1 Eukaryota Opisthokonta Metazoa Annelida Polychaeta Terebellida Alvinellidae Paralvinella Paralvinella palmiformis

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;