RNAquarium Metadata Server
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contig_metadata

2 rows where bioproject = "PRJNA881257", tax_clade = "FCB group" and tax_phylum = "Gemmatimonadota"

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tax_superkingdom 1

tax_phylum 1

  • Gemmatimonadota · 2 ✖

tax_kingdom 1

tax_clade 1

  • FCB group · 2 ✖

bioproject 1

  • PRJNA881257 · 2 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
31698853 31698853 PRJNA881257_P_NODE_16637_length_165_cov_0.896552_g16392_i0 PRJNA881257 16637 165 0.896552 1.4793108 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 72 1.94e-13   NR HEY5418991.1 2026741 g16392 i0 90.2 2.98181818181818 41 4 74.5 0 43 165 1 41 HEY5418991.1 hypothetical protein [Gemmatimonadaceae bacterium] diamond 492 72 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium
32804973 32804973 PRJNA881257_P_NODE_16460_length_165_cov_0.896552_g16215_i0 PRJNA881257 16460 165 0.896552 1.4793108 Gemmatimonadaceae bacterium 2026741 Bacteria Bacteria 53.9 1.44e-6   NR HKP15352.1 2026741 g16215 i0 77.1 0.636363636363636 35 8 63.6 0 110 6 188 222 HKP15352.1 YbaL family putative K(+) efflux transporter [Gemmatimonadaceae bacterium] diamond 105 53.9 1 Bacteria FCB group Pseudomonadati Gemmatimonadota Gemmatimonadia Gemmatimonadales Gemmatimonadaceae   Gemmatimonadaceae bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;