RNAquarium Metadata Server
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contig_metadata

7 rows where bioproject = "PRJNA879314" and tax_phylum = "Mycoplasmatota"

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tax_superkingdom 1

tax_phylum 1

  • Mycoplasmatota · 7 ✖

tax_kingdom 1

bioproject 1

  • PRJNA879314 · 7 ✖

analysis 1

tax_clade 0

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
28539863 28539863 PRJNA879314_P_NODE_5427_length_252_cov_0.871508_g5377_i0 PRJNA879314 5427 252 0.871508 2.19620016 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 69.7 1.04e-12   NR MBR6289324.1 2053494 g5377 i0 47 0.785714285714286 66 32 78.6 1 208 11 68 130 MBR6289324.1 hypothetical protein [Acholeplasmatales bacterium] diamond 198 69.7 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
29549801 29549801 PRJNA879314_P_NODE_1030_length_417_cov_1.380814_g980_i0 PRJNA879314 1030 417 1.380814 5.75799438 Mycoplasmatota bacterium 2231116 Bacteria Bacteria 121 3.73e-30   NR RKX64899.1 2231116 g980 i0 45.7 1.97841726618705 138 72 99.3 1 416 3 7 141 RKX64899.1 MAG: hypothetical protein DRP42_05685 [Mycoplasmatota bacterium] diamond 825 121 1 Bacteria   Bacillati Mycoplasmatota         Mycoplasmatota bacterium
29683963 29683963 PRJNA879314_P_NODE_5270_length_252_cov_0.871508_g5220_i0 PRJNA879314 5270 252 0.871508 2.19620016 root 1 Root_unresolved Root_unresolved 65.9 2.87e-10   NR MBR6289308.1 2053494 g5220 i0 53.3 1.48809523809524 60 26 71.4 1 232 53 375 432 MBR6289308.1 hypothetical protein [Acholeplasmatales bacterium] diamond 375 66.2 0.995468277945619 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
30971720 30971720 PRJNA879314_P_NODE_9914_length_244_cov_0.912281_g9864_i0 PRJNA879314 9914 244 0.912281 2.22596564 Acholeplasmataceae bacterium 1898209 Bacteria Bacteria 130 2.09e-33   NR MFA5692554.1 1898209 g9864 i0 84.9 1.86885245901639 73 11 89.8 0 5 223 132 204 MFA5692554.1 DEAD/DEAH box helicase family protein [Acholeplasmataceae bacterium] diamond 456 130 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales Acholeplasmataceae   Acholeplasmataceae bacterium
32394958 32394958 PRJNA879314_P_NODE_5819_length_251_cov_0.876404_g5769_i0 PRJNA879314 5819 251 0.876404 2.19977404 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 90.1 9.07e-19   NR MBQ9520204.1 2053494 g5769 i0 56.6 0.99203187250996006 83 35 98 1 4 249 3297 3379 MBQ9520204.1 leucine-rich repeat protein [Acholeplasmatales bacterium] diamond 249 90.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium
32647215 32647215 PRJNA879314_P_NODE_10440_length_243_cov_0.917647_g10390_i0 PRJNA879314 10440 243 0.917647 2.22988221 Candidatus Izemoplasmatales bacterium 3018265 Bacteria Bacteria 58.2 1.41e-7   NR MFA5037699.1 3018265 g10390 i0 44 0.925925925925926 75 41 91.4 1 243 22 390 464 MFA5037699.1 hypothetical protein [Candidatus Izemoplasmatales bacterium] diamond 225 58.2 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Candidatus Izemoplasmatales     Candidatus Izemoplasmatales bacterium
32867940 32867940 PRJNA879314_P_NODE_8320_length_247_cov_0.896552_g8270_i0 PRJNA879314 8320 247 0.896552 2.21448344 Acholeplasmatales bacterium 2053494 Bacteria Bacteria 95.1 1.57e-21   NR MBR4496754.1 2053494 g8270 i0 92.3 0.631578947368421 52 4 63.2 0 245 90 227 278 MBR4496754.1 prephenate dehydrogenase [Acholeplasmatales bacterium] diamond 156 95.1 1 Bacteria   Bacillati Mycoplasmatota Mollicutes Acholeplasmatales     Acholeplasmatales bacterium

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;