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contig_metadata

21 rows where bioproject = "PRJNA879314" and tax_phylum = "Fibrobacterota"

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tax_superkingdom 1

tax_phylum 1

  • Fibrobacterota · 21 ✖

tax_kingdom 1

tax_clade 1

bioproject 1

  • PRJNA879314 · 21 ✖

analysis 1

Link rowid ▼ query bioproject node length coverage rel_abundance taxname_lca taxid_lca taxoncategory taxoncategorysimple bits evalue lowcoverage_flag analysis_used target taxid gene allele pident sumperc_cov alnlen mismatch qcov gapopen qstart qend tstart tend target_title analysis sumalnlen maxbits bits_percmax tax_superkingdom tax_clade tax_kingdom tax_phylum tax_class tax_order tax_family tax_genus tax_species
9785750 9785750 PRJNA879314_P_NODE_788_length_475_cov_1.345771_g738_i0 PRJNA879314 788 475 1.345771 6.39241225 Fibrobacter succinogenes 833 Bacteria Bacteria 233 4.91e-76   NR WP_173475114.1 833 g738 i0 95.3 0.802105263157895 127 6 80.2 0 3 383 10 136 WP_173475114.1 DUF4054 domain-containing protein [Fibrobacter succinogenes] diamond 381 233 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter succinogenes
18709231 18709231 PRJNA879314_P_NODE_4075_length_259_cov_1.220430_g4025_i0 PRJNA879314 4075 259 1.22043 3.1609137 Fibrobacterales bacterium 2478481 Bacteria Bacteria 162 1.45e-45   NR MBO7130811.1 2478481 g4025 i0 95.3 0.984555984555985 85 4 98.5 0 3 257 348 432 MBO7130811.1 transposase [Fibrobacterales bacterium] diamond 255 162 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales     Fibrobacterales bacterium
26991836 26991836 PRJNA879314_P_NODE_9382_length_245_cov_0.906977_g9332_i0 PRJNA879314 9382 245 0.906977 2.22209365 Fibrobacter sp. 35828 Bacteria Bacteria 126 2.2299999999999993e-34   NR MBQ3839585.1 35828 g9332 i0 76.3 0.979591836734694 80 19 98 0 242 3 4 83 MBQ3839585.1 hypothetical protein [Fibrobacter sp.] diamond 240 126 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
27750514 27750514 PRJNA879314_P_NODE_2344_length_311_cov_1.441176_g2294_i0 PRJNA879314 2344 311 1.441176 4.48205736 Fibrobacter sp. 35828 Bacteria Bacteria 196 1.4999999999999999e-58   NR WP_291024815.1 35828 g2294 i0 97.1 0.993569131832797 103 3 99.4 0 310 2 305 407 WP_291024815.1 DUF1073 domain-containing protein [Fibrobacter sp.] diamond 309 196 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
27939830 27939830 PRJNA879314_P_NODE_11045_length_242_cov_0.923077_g10995_i0 PRJNA879314 11045 242 0.923077 2.23384634 Fibrobacteria bacterium 2725311 Bacteria Bacteria 105 1.75e-24   NR HQF53583.1 2725311 g10995 i0 92.5 0.991735537190083 80 6 99.2 0 2 241 245 324 HQF53583.1 AgmX/PglI C-terminal domain-containing protein [Fibrobacteria bacterium] diamond 240 105 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
27971254 27971254 PRJNA879314_P_NODE_10245_length_244_cov_0.894737_g10195_i0 PRJNA879314 10245 244 0.894737 2.18315828 uncultured Fibrobacter sp. 261512 Bacteria Bacteria 85.1 1.94e-17   NR WP_297702366.1 261512 g10195 i0 58.8 1.19262295081967 97 20 95.9 3 234 1 1 96 WP_297702366.1 TrmH family RNA methyltransferase, partial [uncultured Fibrobacter sp.] diamond 291 85.1 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter uncultured Fibrobacter sp.
28003090 28003090 PRJNA879314_P_NODE_8345_length_247_cov_0.896552_g8295_i0 PRJNA879314 8345 247 0.896552 2.21448344 Fibrobacter sp. 35828 Bacteria Bacteria 126 3.21e-34   NR MBO7413999.1 35828 g8295 i0 72.8 0.983805668016194 81 22 98.4 0 246 4 69 149 MBO7413999.1 hypothetical protein [Fibrobacter sp.] diamond 243 126 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
28066001 28066001 PRJNA879314_P_NODE_8805_length_246_cov_0.901734_g8755_i0 PRJNA879314 8805 246 0.901734 2.21826564 Fibrobacter sp. 35828 Bacteria Bacteria 43.9 0.0152   NR MBO4712786.1 35828 g8755 i0 35.7 1.02439024390244 84 47 97.6 4 4 243 309 389 MBO4712786.1 hypothetical protein [Fibrobacter sp.] diamond 252 43.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
28129269 28129269 PRJNA879314_P_NODE_8645_length_246_cov_0.901734_g8595_i0 PRJNA879314 8645 246 0.901734 2.21826564 Fibrobacteria bacterium 2725311 Bacteria Bacteria 142 6.029999999999998e-42   NR HQF54261.1 2725311 g8595 i0 89.5 0.926829268292683 76 8 92.7 0 1 228 45 120 HQF54261.1 hypothetical protein [Fibrobacteria bacterium] diamond 228 142 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
28602891 28602891 PRJNA879314_P_NODE_6367_length_250_cov_0.881356_g6317_i0 PRJNA879314 6367 250 0.881356 2.20339 Fibrobacteria bacterium 2725311 Bacteria Bacteria 67.4 7.65e-11   NR MCB9495955.1 2725311 g6317 i0 57.8 0.54 45 19 54 0 246 112 337 381 MCB9495955.1 DUF116 domain-containing protein [Fibrobacteria bacterium] diamond 135 67.4 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
28666046 28666046 PRJNA879314_P_NODE_2807_length_292_cov_1.424658_g2757_i0 PRJNA879314 2807 292 1.424658 4.16000136 uncultured Fibrobacter sp. 261512 Bacteria Bacteria 178 1.75e-51   NR WP_295055254.1 261512 g2757 i0 87.6 0.996575342465753 97 12 99.7 0 291 1 373 469 WP_295055254.1 baseplate J/gp47 family protein [uncultured Fibrobacter sp.] diamond 291 178 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter uncultured Fibrobacter sp.
29549805 29549805 PRJNA879314_P_NODE_2350_length_311_cov_1.168067_g2300_i0 PRJNA879314 2350 311 1.168067 3.63268837 Fibrobacter sp. 35828 Bacteria Bacteria 195 1.3599999999999998e-56   NR WP_291024813.1 35828 g2300 i0 96.1 0.993569131832797 103 4 99.4 0 3 311 71 173 WP_291024813.1 phage minor head protein [Fibrobacter sp.] diamond 309 195 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
29549815 29549815 PRJNA879314_P_NODE_7730_length_248_cov_0.891429_g7680_i0 PRJNA879314 7730 248 0.891429 2.21074392 Fibrobacteria bacterium 2725311 Bacteria Bacteria 73.9 3.22e-13   NR HKP98437.1 2725311 g7680 i0 78.7 0.568548387096774 47 9 56.9 1 246 106 326 371 HKP98437.1 hypothetical protein [Fibrobacteria bacterium] diamond 141 73.9 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
29992183 29992183 PRJNA879314_P_NODE_11271_length_242_cov_0.923077_g11221_i0 PRJNA879314 11271 242 0.923077 2.23384634 Fibrobacter sp. 35828 Bacteria Bacteria 160 1.55e-47   NR WP_290941217.1 35828 g11221 i0 95 2.97520661157025 80 4 99.2 0 241 2 28 107 WP_290941217.1 hypothetical protein [Fibrobacter sp.] diamond 720 160 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
30403299 30403299 PRJNA879314_P_NODE_7553_length_248_cov_0.891429_g7503_i0 PRJNA879314 7553 248 0.891429 2.21074392 Fibrobacter sp. 35828 Bacteria Bacteria 163 2.64e-46   NR WP_291024815.1 35828 g7503 i0 100 3.96774193548387 82 0 99.2 0 3 248 209 290 WP_291024815.1 DUF1073 domain-containing protein [Fibrobacter sp.] diamond 984 163 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
30908525 30908525 PRJNA879314_P_NODE_10274_length_244_cov_0.859649_g10224_i0 PRJNA879314 10274 244 0.859649 2.09754356 Fibrobacterales bacterium 2478481 Bacteria Bacteria 72 1.86e-12   NR MBP5189129.1 2478481 g10224 i0 52.4 1.00819672131148 82 38 99.6 1 243 1 111 192 MBP5189129.1 carbohydrate-binding protein [Fibrobacterales bacterium] diamond 246 72 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales     Fibrobacterales bacterium
30908537 30908537 PRJNA879314_P_NODE_6714_length_249_cov_0.886364_g6664_i0 PRJNA879314 6714 249 0.886364 2.20704636 Fibrobacterota bacterium 2052160 Bacteria Bacteria 150 2.41e-41   NR MBW8890412.1 2052160 g6664 i0 94 1 83 5 100 0 249 1 84 166 MBW8890412.1 sigma-54-dependent Fis family transcriptional regulator [Fibrobacterota bacterium] diamond 249 150 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
31572455 31572455 PRJNA879314_P_NODE_10656_length_243_cov_0.917647_g10606_i0 PRJNA879314 10656 243 0.917647 2.22988221 Fibrobacteria bacterium 2725311 Bacteria Bacteria 110 4.75e-28   NR HQF53842.1 2725311 g10606 i0 70.9 0.975308641975309 79 23 97.5 0 4 240 44 122 HQF53842.1 pyridoxal phosphate-dependent aminotransferase [Fibrobacteria bacterium] diamond 237 110 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria       Fibrobacteria bacterium
31675039 31675039 PRJNA879314_P_NODE_10017_length_244_cov_0.912281_g9967_i0 PRJNA879314 10017 244 0.912281 2.22596564 Pseudomonadati 3379134 Bacteria Bacteria 156 8.18e-44   NR WP_290953281.1 35828 g9967 i0 93.8 59.7540983606557 81 5 99.6 0 244 2 57 137 WP_290953281.1 ABC transporter ATP-binding protein [Fibrobacter sp.] diamond 14580 157 0.993630573248408 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter sp.
32015135 32015135 PRJNA879314_P_NODE_10358_length_243_cov_0.917647_g10308_i0 PRJNA879314 10358 243 0.917647 2.22988221 Fibrobacterota bacterium 2052160 Bacteria Bacteria 124 6.989999999999999e-31   NR MEK7391542.1 2052160 g10308 i0 69.6 0.975308641975309 79 24 97.5 0 241 5 414 492 MEK7391542.1 TonB-dependent receptor plug domain-containing protein [Fibrobacterota bacterium] diamond 237 124 1 Bacteria FCB group Pseudomonadati Fibrobacterota         Fibrobacterota bacterium
32899325 32899325 PRJNA879314_P_NODE_6840_length_249_cov_0.886364_g6790_i0 PRJNA879314 6840 249 0.886364 2.20704636 Fibrobacter succinogenes 833 Bacteria Bacteria 85.5 1.7e-17   NR WP_173475118.1 833 g6790 i0 51.3 0.939759036144578 78 35 94 1 3 236 83 157 WP_173475118.1 DUF3383 family protein [Fibrobacter succinogenes] diamond 234 85.5 1 Bacteria FCB group Pseudomonadati Fibrobacterota Fibrobacteria Fibrobacterales Fibrobacteraceae Fibrobacter Fibrobacter succinogenes

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CREATE TABLE contig_metadata(query VARCHAR, bioproject VARCHAR, node VARCHAR, length VARCHAR, coverage VARCHAR, rel_abundance VARCHAR, taxname_lca VARCHAR, taxid_lca VARCHAR, taxoncategory VARCHAR, taxoncategorysimple VARCHAR, bits VARCHAR, evalue VARCHAR, lowcoverage_flag VARCHAR, analysis_used VARCHAR, "target" VARCHAR, taxid VARCHAR, gene VARCHAR, allele VARCHAR, pident VARCHAR, sumperc_cov VARCHAR, alnlen VARCHAR, mismatch VARCHAR, qcov VARCHAR, gapopen VARCHAR, qstart VARCHAR, qend VARCHAR, tstart VARCHAR, tend VARCHAR, target_title VARCHAR, analysis VARCHAR, sumalnlen VARCHAR, maxbits VARCHAR, bits_percmax VARCHAR, tax_superkingdom VARCHAR, tax_clade VARCHAR, tax_kingdom VARCHAR, tax_phylum VARCHAR, tax_class VARCHAR, tax_order VARCHAR, tax_family VARCHAR, tax_genus VARCHAR, tax_species VARCHAR);;